Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 336 a.a., type IV secretion protein AvhB11 from Agrobacterium fabrum C58

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 24/210 (11%)

Query: 225 VSDATPIVDGSLPDGSRINILYSGDVSLKGPSFTIRKFTDVPISITQIISWG-------- 276
           + +  PI+  +LP   RI I+          S TIRK + V  S+  +   G        
Sbjct: 73  IDETRPILSATLPGNERIQIVIPPATINDTVSMTIRKPSSVDFSLDDLEEKGFFQTACAA 132

Query: 277 TMSAQTAAYLWLCLEYGM---------------SIFICGETASGKTTSLNAILPFIKPKS 321
           T ++ +A    LC  Y                 +I I G T S KTT   A++  I    
Sbjct: 133 TSTSSSAQDEELCETYRAGRFKDFLRQAVIARKNIIISGATGSAKTTLSKALIKHIPENE 192

Query: 322 KIFSCEDTSEVKPPNPVWQQLLTRERGPEESRVTLFDLLRAALRSRPNYIIVGEIRSVEG 381
           ++ S EDT E+    P   +L   +     SR    +LL + LR RP+ I++ E+R    
Sbjct: 193 RVISIEDTPELVISQPNHVRLFYSKGRQGLSRAGPKELLESCLRMRPDRILLQELRDGTA 252

Query: 382 AVAFQAMQTGHP-VISTFHAANVRKMIQRL 410
               + + +GHP  I+T HA +     ++L
Sbjct: 253 FYYIRNVNSGHPGSITTVHANSAELAFEQL 282