Pairwise Alignments

Query, 322 a.a., flagellar protein D from Methanococcus maripaludis S2

Subject, 135 a.a., flagellar protein E from Methanococcus maripaludis S2

 Score =  110 bits (275), Expect = 2e-29
 Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 1/116 (0%)

Query: 203 ARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDYYHNLGWVSGKAISKLMKVSKNM 262
           A+L+ +PED  S +  FKWLE+L  RVG  N+ D+L++Y+NLGW+S  AIS L+K SK +
Sbjct: 17  AKLEAVPEDAFSLIFAFKWLEYLSERVGQSNIADILEFYYNLGWLSDNAISGLLKFSKGI 76

Query: 263 KYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVEELEGMEREINRIKKWAEE 318
           K   +DI   + + +   DH+VSLL+IE+L G+ I+ E L+ +E EI RIK+ AE+
Sbjct: 77  KIEDDDIASPSGK-LTIADHLVSLLFIERLNGKKISSEVLDKLEWEIRRIKRGAEQ 131