Pairwise Alignments

Query, 1025 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 446 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score =  178 bits (451), Expect = 8e-49
 Identities = 127/452 (28%), Positives = 238/452 (52%), Gaps = 32/452 (7%)

Query: 1   MYRELSKEELLEKFDEYITSEDIKKRAESTKILGYLGINDIKSRMDNILSLTFENDISIR 60
           MY+   K +L   FD+YI S++ K + E+ KILG L    +  RM  I+ L  + +I++ 
Sbjct: 1   MYQSTDKNDLAALFDKYIESDNYKDKTEAAKILGLLDEQALDERMQKIVILNSDPNIAVL 60

Query: 61  LNLITAFSNILNKFPEVFSELIGCIYYNTEFSNNILSEHAKNEIKALGPEVIERHVEHFR 120
           LNL+++   IL K+P+   +L+  +Y NTEFSN+++ E ++  I ++ P+VI+  V H+ 
Sbjct: 61  LNLLSSIKVILLKYPKKAGKLLIHVYINTEFSNHLVKEFSRQIIDSINPKVIDNLVVHYN 120

Query: 121 NGIYSKNTEERLKSVILLSLISRFSPEYLDKALSEIVMASTYDSSALIQLLALGTLDDFS 180
           + +YSKN  E  +++++L  +S  +P YL  +L E+ M S Y  S L+++L+   LD+F 
Sbjct: 121 SKLYSKNNFEVARALLVLGFVSMHTPRYLKNSLPELSMISLYSRSELLRILSQAILDEFE 180

Query: 181 EINRNFLR-YSYLVFNKKMDITPLNKSKTGAEITKSLIRLTVSDEIDGNTINELLKYLSI 239
            I ++ ++   +L+ +   +   LN      ++ K L+ L + +EI  + +  +LKYL  
Sbjct: 181 NIPKSIIKDLKFLIESPDANEDNLNAEN---DLLKKLVILNLKNEISEDELLFILKYLDD 237

Query: 240 ENDFCTLLAAISLQ------NNILKVEKNFEDYPLIFQDQLSKFYKKHP-NNVQQLISYS 292
            +    LL+AI+L+       N+++ +   + + LI      K Y+      +  L+++S
Sbjct: 238 ADYRIALLSAITLKKHQKLLKNLIRSKNELDVHSLI----SGKLYESDEITAINALLAFS 293

Query: 293 LILDITHSLNLEIKNVDFEKIFYYLKKNISGKDHISKAFSLIILY---LLHKMEKLNLDE 349
               +T  +NLE   +D ++    ++  +  K++++    LI  Y   +L+    LN DE
Sbjct: 294 Y---LTIDMNLE---MDTKRCIKLIENQV--KEYLTHENYLISFYGFEMLNSFVLLNNDE 345

Query: 350 ---EIDEIFDNYPFENILKEHPLCYYFGMPLLAE--KYNTLPEVDKSPYLIRSLELKMQY 404
               I++I +N  F  +  ++ L YY G  LL    +Y+ L   +K+ Y    L ++   
Sbjct: 346 LNLLIEKILENNDFGKLFGKNNLNYYSGTRLLVNLGRYDLL-SPEKNMYFDEDLMIEYGE 404

Query: 405 MAPTERHHYIKSAEKNIKSDYWLERYNGAKKI 436
           ++        K+ EK  K++ WL R+   KK+
Sbjct: 405 LSKNRAIEQFKNLEKEFKNEDWLYRFEIGKKL 436