Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 277 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  140 bits (354), Expect = 2e-38
 Identities = 79/249 (31%), Positives = 139/249 (55%), Gaps = 5/249 (2%)

Query: 8   KMSIFLTFLFT-FLLFLSISSLILVPKF---DDVLSSIFNPEMIYSLKVSLYSSLISTGI 63
           K+S+ +T  +   ++ L +S+L+         +  S I +P  + S +V++  +L +T  
Sbjct: 14  KLSLGVTLTYVAIIVLLPLSALVFKAASLGPAEYWSIISSPRAVASYRVTVLCALAATLF 73

Query: 64  VLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLF-GQTFIGDILEFFG 122
            + F +   + ++RY FPG  IV AI+DLP A P  V G+AL  LF G  + G +L   G
Sbjct: 74  NVVFGVALAWVLTRYRFPGWRIVDAIVDLPFALPTAVAGIALTTLFAGNGWFGSLLAPLG 133

Query: 123 IKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMA 182
           IKV +T +GI+VA  FT+LP+ +R V    +D++P  E  ++SLG S+ E F+ + LP+ 
Sbjct: 134 IKVAYTPVGIMVAMAFTSLPFIVRTVQPVLEDLDPALEEAAQSLGGSDLEVFRKIILPLL 193

Query: 183 RSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLL 242
              + A   ++FAR +G FG ++ +AG     TE   + +++ +   +   A +   VLL
Sbjct: 194 TPALLAGLSLSFARSLGEFGAIIFIAGNQPFSTEITALLIFIRLEEYDYQAAAAIASVLL 253

Query: 243 MISFIAILI 251
           + +F+ + +
Sbjct: 254 ITAFVMLAV 262