Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 235 a.a., ABC transporter, membrane spanning protein (molybdate) from Agrobacterium fabrum C58

 Score =  104 bits (260), Expect = 1e-27
 Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 5/215 (2%)

Query: 43  NPEMIYSLKVSLYSSLISTGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLG 102
           +PE   ++++SL+ S I+    L F I    A++R  F GKS++  I+ LP+  P +V G
Sbjct: 9   SPEEWTAIRLSLWVSSIAMLASLPFGIAVAVALARGRFWGKSLLNGIVHLPLILPPVVTG 68

Query: 103 LALLLLFGQT-FIGDILE-FFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYE 160
             LL+LFG+   IG  L+ +FGI   F   G  +A    A P  +R +  + + ++ + E
Sbjct: 69  FLLLVLFGRRGAIGQFLDSWFGIVFSFRWTGAALACAVMAFPLMVRSIRLSIEAVDRKLE 128

Query: 161 LVSRSLGYSEFETFKNVTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPI 220
             + +LG S    F  VTLP+   GI A  I+AFA+ MG FG  +         T+TL  
Sbjct: 129 EAAGTLGASPLWVFLTVTLPLTLPGIIAGMILAFAKAMGEFGATITFVSNIPGETQTLSA 188

Query: 221 TLY--LNMSYGNLGMAISSGIVLLMISFIAILIFE 253
            +Y    +  G+ G A+   IV ++IS +A+L+ E
Sbjct: 189 AIYTFTQVPGGDAG-ALRLTIVSVVISILALLVSE 222