Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 290 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  110 bits (274), Expect = 4e-29
 Identities = 65/246 (26%), Positives = 131/246 (53%), Gaps = 3/246 (1%)

Query: 9   MSIFLTFLFTFLLFLSISSLILVPK--FDDVLSSIFNPEMIYSLKVSLYSSLISTGIVLG 66
           +++   FL  FL+   +S      +   D    +I  P+ + +++++L  + IS  + + 
Sbjct: 28  IAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAISVPLNVV 87

Query: 67  FSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFG-QTFIGDILEFFGIKV 125
           F +   +AI+++ F GK+ +  ++DLP +   ++ GL  ++LF   + +G  L+ +GI++
Sbjct: 88  FGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIEI 147

Query: 126 VFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSG 185
           +F   GIV+A IF   P+  R +    QD     E  + SLG S ++TF  VTLP  + G
Sbjct: 148 LFAVPGIVLATIFVTFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNIKWG 207

Query: 186 IFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLMIS 245
           +    ++  AR MG FG V +++G     T T+P+ + +  +  N+G + +   +L  ++
Sbjct: 208 LLYGVLLCNARAMGEFGAVSVVSGHIRGETNTMPLHVEILYNEYNIGASFAVATLLAGLA 267

Query: 246 FIAILI 251
            + +++
Sbjct: 268 LVTLVL 273