Pairwise Alignments

Query, 353 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  192 bits (487), Expect = 1e-53
 Identities = 112/324 (34%), Positives = 185/324 (57%), Gaps = 15/324 (4%)

Query: 1   LSFVKIENLNINLGEFK-LEDVNLSVEKGDYVTIIGPTGSGKSILLETALGFYTPETGKI 59
           +S ++I N++ + G  + L  V+++VE+G++VTI+GP+G GKS LL    G   P  G+I
Sbjct: 1   MSELEISNISKDYGASRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEI 60

Query: 60  FLEETDITNLNPEKRDISIIYQDYALFPHMTVYENIEYGLKKRLNDKKTIKEEIIQITKM 119
            L    I    PE RDI++++Q YALFPHM+V +N+ +GLK +   K      I    ++
Sbjct: 61  RLGGKRIDQAQPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHALEI 120

Query: 120 LGIDHLLNRKPETLSGGEMQRASIARGLIIKPKILFMDEPFSALDVKTKEKIRVLVKTAI 179
             +  L++R P  LSGG+ QR ++AR ++++P +L  DEP S LD K ++ +R  +    
Sbjct: 121 CNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELH 180

Query: 180 KKYGTTVLHVTHDFEDIWSLADKVLIMKGGRVYQYGTPEEVFSNPSSEIVADFVG-TNIL 238
           ++ G T L+VTHD  +  +++D++++M  GRV + GTP E++  P     A F+G TN+L
Sbjct: 181 RRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLGQTNLL 240

Query: 239 DSKVEEISGNISVLDVSGVKIYSSDIAKVGENVKVSIRPENIIVALKCFDSSAKNVFNGK 298
                 +S       +   +  + D A  G NV++S RPENI +   C D +     +G 
Sbjct: 241 -----PVSAEGQQAQLPWGQSVTLDQAAAG-NVQISARPENIHI---CADQAG----DGT 287

Query: 299 VTEIKKRGHLVWLTLDIGGVDLKV 322
           V+ +   G     T++IGG  ++V
Sbjct: 288 VSAVSFMGANALYTVEIGGRQIRV 311