Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 638 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Variovorax sp. SCN45

 Score =  230 bits (587), Expect = 8e-65
 Identities = 122/263 (46%), Positives = 174/263 (66%), Gaps = 2/263 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E    ++F D+ G +    +++EVV+  LK+P+ F+K+G   P+G+LL GPPGTGKTLLA
Sbjct: 153 ENNNTVTFADVAGCDEAKEEVREVVDF-LKDPQRFQKLGGRIPRGLLLVGPPGTGKTLLA 211

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           K++A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCIIFIDEIDAV  +R  
Sbjct: 212 KSIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGA 271

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            L GG+ E ++TL Q+L EMDGF++   V ++AATNRPDILD A+LRPGRFDR + +++P
Sbjct: 272 GLGGGNDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDAALLRPGRFDRQVYVTLP 331

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +IL +H  K+ L + V+   +A+    M GADL  +C EA + A R     ++M
Sbjct: 332 DIRGREQILGVHMRKVPLGQDVNPSVIARGTPGMSGADLANLCNEAALMAARRNARVVEM 391

Query: 379 DDFREAISKITGKKEKCSYDMPQ 401
            DF +A  KI    E+ S  MP+
Sbjct: 392 QDFEKAKDKIFMGPERKSMVMPE 414