Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 774 a.a., AAA family ATPase from Variovorax sp. OAS795

 Score = 51.6 bits (122), Expect = 8e-11
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 188 YGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFI 247
           YG PGTGKT LA+ +A       +    S+L+ K++GE  + +  +FK A E    ++ +
Sbjct: 570 YGAPGTGKTALAEHIAKAIGRPLIIKQASDLMSKYVGETEQNMAAMFKEA-EAEKAVLLL 628

Query: 248 DEIDAVASKRTESLTGGDREVQRT-LMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILR 306
           DE D+    R     G  R  + T + ++L  M+ F+       I  TN  D LD A LR
Sbjct: 629 DEADSFLQDR----RGAQRTYEVTEVNEMLQGMERFNG----IFICTTNLLDRLDQAALR 680



 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 49/213 (23%)

Query: 181 PPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVV----------------GSELVKKFIG 224
           P   VLLYGPPGTGKT LAK VA         V                   ++ + F+ 
Sbjct: 310 PGVNVLLYGPPGTGKTELAKVVAQAAGLELFEVEYADRDGNSLSGRDRYRSLQIAQVFLK 369

Query: 225 EGAKL------VRDVF-KLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLA 277
             A+       V DVF  ++ E +  +   +++ A AS        G    +  + Q+L 
Sbjct: 370 GSAQAALLFDEVEDVFPPISTEAAQFMARAEQVPAAAS--------GSVSGKAWVNQIL- 420

Query: 278 EMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL 337
                     V  +  TNR + +DPA  R  RF   +E+  P    R +++     K  L
Sbjct: 421 ------EANPVPTLWVTNRIEQIDPAFRR--RFAYHLELKSPPPGAREQLV-----KKTL 467

Query: 338 KGVDLRE--VAKIAE--NMVGADLKAVCTEAGM 366
           +G+ + E   AK+AE   +  A ++     AG+
Sbjct: 468 EGIAVSEAFTAKLAERKGLTPAQIRTAVRFAGL 500