Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 634 a.a., membrane protease FtsH catalytic subunit from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  216 bits (551), Expect = 1e-60
 Identities = 116/261 (44%), Positives = 167/261 (63%), Gaps = 2/261 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E++   +  D+ G +    ++ E+VE  L++P  F+++G   P+GVL+ GPPGTGKTL+A
Sbjct: 146 EDQVKTTLADVAGCDEAKEEVGELVEF-LRDPGKFQRLGGRIPRGVLMVGPPGTGKTLIA 204

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           KA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCIIFIDEIDAV   R  
Sbjct: 205 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGA 264

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            + GG  E ++TL QLL EMDGF+    + +IAATNRPD+LDPA+LRPGRFDR + + +P
Sbjct: 265 GMGGGHDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 324

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +ILK+H  K+ + + V+   +A+      GADL  +  EA +FA R  +  ++M
Sbjct: 325 DIRGREQILKVHMRKVPMGEDVNPGVIARGTPGFSGADLANLVNEASLFAARSGKRVVEM 384

Query: 379 DDFREAISKITGKKEKCSYDM 399
            +F  A  KI    E+ S  M
Sbjct: 385 KEFELAKDKIMMGAERKSMVM 405