Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 648 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Sphingobium sp. HT1-2

 Score =  222 bits (566), Expect = 2e-62
 Identities = 117/261 (44%), Positives = 168/261 (64%), Gaps = 2/261 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E+   ++F+D+ G++    +++E+VE  LK+P  F ++G   PKG LL G PGTGKTLLA
Sbjct: 156 EKHGKVTFDDVAGIDEAREELQEIVEF-LKDPSKFARLGGKIPKGALLVGSPGTGKTLLA 214

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           +A+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCI+FIDEIDAV   R  
Sbjct: 215 RAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGA 274

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            L  G+ E ++TL QLL EMDGF++   + I+AATNRPD+LDPA+LRPGRFDR + +  P
Sbjct: 275 GLGNGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVVVPRP 334

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D +GR +IL +H +K+ L   V+ R +A+      GADL  +  EA + A R  +  + M
Sbjct: 335 DIEGREKILAVHMKKVPLAPDVNPRTIARGTPGFSGADLANLVNEAALMAARRGKRLVAM 394

Query: 379 DDFREAISKITGKKEKCSYDM 399
           D+F  A  K+    E+ S  M
Sbjct: 395 DEFEAAKDKVMMGSERRSMVM 415