Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 371 a.a., AAA family ATPase from Methanococcus maripaludis S2

 Score =  157 bits (396), Expect = 6e-43
 Identities = 98/248 (39%), Positives = 150/248 (60%), Gaps = 12/248 (4%)

Query: 144 DISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
           + +FE++ G  +  +  K V++  L+NPELF   G   PK +L YGPPGTGKT+LA+A+A
Sbjct: 122 ETTFEEVVGQIDAKKKCKIVIKY-LENPELF---GEWAPKNILFYGPPGTGKTMLARALA 177

Query: 204 YETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVA-SKRTESLT 262
            ET+     +  +EL+   +G+G+K +  +++ A E +P IIFIDE+DA+A S++ +SL 
Sbjct: 178 TETDVPLYLIKATELIGDHVGDGSKQIESLYENASENTPSIIFIDELDAIALSRQFQSLR 237

Query: 263 GGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDED 322
           G   +V   +  LL E+DG  +   V  IAATN P++LD AI    RF+  IE  MPD++
Sbjct: 238 G---DVSEVVNALLTELDGIKNNLGVVTIAATNNPEMLDNAI--RSRFEEEIEFKMPDDN 292

Query: 323 GRLEILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAVCTEAGMF-AIREEREFIKMDD 380
            RL+IL+++ EKM +    DL++  +  + M G  +K    +  +  AI E+RE I   D
Sbjct: 293 ERLKILELYAEKMPIAVNADLKKYVEKTKGMNGRTIKEKFLKPALHKAILEDRESITQKD 352

Query: 381 FREAISKI 388
             E I KI
Sbjct: 353 LDEIIKKI 360