Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 676 a.a., ATP-dependent Zn protease from Magnetospirillum magneticum AMB-1

 Score =  110 bits (274), Expect = 2e-28
 Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 12/228 (5%)

Query: 134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP----PKGVLLYG 189
           AM  + +  PDI+  D+GG+   +          L N     + GI+      +GVLL G
Sbjct: 228 AMIAKRQIIPDITLADLGGMEEAV-----TWGFSLANDLAEYRDGILSWSEVDRGVLLSG 282

Query: 190 PPGTGKTLLAKAVAYETNASFVRV-VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFID 248
           PPG GKT  A+A+A       +   +G       +G+  K +R  F+ A+  +P I+ +D
Sbjct: 283 PPGCGKTTFARALAGSCGTPLIASSLGEWQAAGHLGDLLKAMRRTFEQARAAAPAILLVD 342

Query: 249 EIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPG 308
           EID    +   S    D  VQ  +   L  +DG  +R  + ++ ATN P  LDPAI R G
Sbjct: 343 EIDGFGDRANLSSGHKDYSVQ-VINGFLELLDGVVAREGIVVVGATNHPSRLDPAITRSG 401

Query: 309 RFDRIIEISMPDEDGRLEILKIHTEKMNLKGVDLREVAKIAENMVGAD 356
           R DR I I +PDE G  +IL+ H    +L G DL   AK+A    GAD
Sbjct: 402 RLDRHITIGLPDEGGLTKILRHHLGD-DLPGEDLSAAAKLALGGTGAD 448