Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 644 a.a., protease, ATP-dependent zinc-metallo (NCBI) from Escherichia coli BW25113

 Score =  226 bits (575), Expect = 2e-63
 Identities = 121/266 (45%), Positives = 169/266 (63%), Gaps = 2/266 (0%)

Query: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
           M  E++   +F D+ G +    ++ E+VE  L+ P  F+K+G   PKGVL+ GPPGTGKT
Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKT 199

Query: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
           LLAKA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCIIFIDEIDAV  +
Sbjct: 200 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQ 259

Query: 257 RTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEI 316
           R   L GG  E ++TL Q+L EMDGF+    + +IAATNRPD+LDPA+LRPGRFDR + +
Sbjct: 260 RGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 319

Query: 317 SMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREF 375
            +PD  GR +ILK+H  ++ L   +D   +A+      GADL  +  EA +FA R  +  
Sbjct: 320 GLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRV 379

Query: 376 IKMDDFREAISKITGKKEKCSYDMPQ 401
           + M +F +A  KI    E+ S  M +
Sbjct: 380 VSMVEFEKAKDKIMMGAERRSMVMTE 405