Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 648 a.a., ATP-dependent zinc metalloprotease FtsH from Alteromonas macleodii MIT1002

 Score =  228 bits (581), Expect = 4e-64
 Identities = 120/263 (45%), Positives = 170/263 (64%), Gaps = 2/263 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E++   +F D+ G +    D+ E+V+  L++P  F+K+G   PKGVL+ GPPGTGKTLLA
Sbjct: 148 EDQIKTTFADVAGCDEAKEDVSELVDF-LRDPSKFQKLGGKIPKGVLMVGPPGTGKTLLA 206

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           KA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCIIFIDEIDAV  +R  
Sbjct: 207 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGA 266

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            L GG  E ++TL Q+L EMDGF+    + +IAATNRPD+LDPA+LRPGRFDR + + +P
Sbjct: 267 GLGGGHDEREQTLNQMLVEMDGFEGHEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 326

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +ILK+H  K+ +   V+   +A+      GADL  +  EA +FA R  +  + M
Sbjct: 327 DIRGREQILKVHIRKVPVADNVEPSVIARGTPGFSGADLANLVNEAALFAARGNKRLVSM 386

Query: 379 DDFREAISKITGKKEKCSYDMPQ 401
           ++F +A  KI    E+ S  M +
Sbjct: 387 EEFEKAKDKIMMGSERKSMVMSE 409