Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 345 a.a., AAA-family ATPase from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 4e-28
 Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%)

Query: 178 GIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLA 237
           G+ P + +LL GPPG+GKT+ A A+A E +     V    L+ KF+GE A  +R VF  A
Sbjct: 136 GLAPRRKLLLIGPPGSGKTMTAAALAGELHTPLFTVQLDGLMTKFMGETASKLRLVFS-A 194

Query: 238 KEKSPCIIFIDEIDAVASKRTESLTGGD-REVQRTLMQLLAEMDGFDSRGDVKIIAATNR 296
             ++  + F DE DA+ +KR E    G+ R V  + +Q L E        D  ++AATN 
Sbjct: 195 MAETKGVYFFDEFDAIGAKRAERNDVGEIRRVLNSFLQFLEE-----DESDGLVVAATNH 249

Query: 297 PDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKGVDLREVAKIAENMVGAD 356
           P++LDPA+ R  RFD +IE ++P  +    IL+      + + +D  +    A  +  A+
Sbjct: 250 PELLDPALFR--RFDDVIEYALPSVEVATGILQARLSGFDTQDIDWTKAVADAAGLSQAE 307

Query: 357 LKAVCTEAGMFAIREEREFIKMDDFREAISKITG 390
           +     +A    +  +R+ I  +D   AI++  G
Sbjct: 308 IARAAADAAKLVVLSDRDRITQNDLSLAIAERKG 341