Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 631 a.a., ATP-dependent zinc metalloprotease FtsH from Acinetobacter radioresistens SK82

 Score =  221 bits (564), Expect = 4e-62
 Identities = 113/250 (45%), Positives = 162/250 (64%), Gaps = 2/250 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E++  ++F D+ G +   +++ E+V+  LK+P  F+++G   PKGVL+ GPPGTGKTLLA
Sbjct: 149 EDQIKVTFADVAGCDEAKQEVVEIVDF-LKDPAKFKRLGATIPKGVLMVGPPGTGKTLLA 207

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           KA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK  +PCIIFIDEIDAV   R  
Sbjct: 208 KAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGS 267

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
              GG  E ++TL Q+L EMDGF+    + +IAATNR D+LD A+LRPGRFDR + + +P
Sbjct: 268 GTGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRADVLDKALLRPGRFDRQVMVGLP 327

Query: 320 DEDGRLEILKIHTEKM-NLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +IL +H  K+ +  GVD++ +A+      GA L  +  EA +FA R  +  + M
Sbjct: 328 DIKGREQILNVHLRKLPSTTGVDVKVLARGTPGFSGAQLANLVNEAALFAARRNKNTVDM 387

Query: 379 DDFREAISKI 388
            DF +A  K+
Sbjct: 388 HDFEDAKDKL 397