Pairwise Alignments

Query, 184 a.a., Era-like GTP-binding protein from Methanococcus maripaludis S2

Subject, 462 a.a., GTPase Der from Xanthobacter sp. DMC5

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)

Query: 6   FKIALVGPENSGKSSLVNSIFGKNISEVSEVGGTTKMPVKKFWGKIKIGKQKINPDFAKI 65
           F +A+VG  N GKS+L N + GK ++ V +  G T+    +  G+ ++G          +
Sbjct: 3   FSLAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTR---DRREGEGRLG---------DL 50

Query: 66  TF--VDLGGLYAGENRSVVMVGSVLEKTYEEIDDSDLIIHIIDGSTDLFKSFEKLHHLLK 123
           TF  VD  GL   E     + G +  +T   I D D I+ +ID    L  +      L++
Sbjct: 51  TFRIVDTAGL--EEATPASLEGRMRAQTEAAIGDCDAILFMIDARIGLTPTDRAFADLVR 108

Query: 124 FRYRKPIIVVINKCD 138
            +  KP+I+V NK +
Sbjct: 109 -KAGKPVILVANKSE 122



 Score = 29.3 bits (64), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 7   KIALVGPENSGKSSLVNSIFGKNISEVSEVGGTTK 41
           K+A++G  N+GKS+L+N + G++        G T+
Sbjct: 199 KVAVLGRPNAGKSTLINKLLGEDRLLTGPEAGITR 233