Pairwise Alignments

Query, 184 a.a., Era-like GTP-binding protein from Methanococcus maripaludis S2

Subject, 476 a.a., GTP-binding protein from Agrobacterium fabrum C58

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 13/133 (9%)

Query: 6   FKIALVGPENSGKSSLVNSIFGKNISEVSEVGGTTKMPVKKFWGKIKIGKQKINPDFAKI 65
           F +A+VG  N GKS+L N + GK ++ V +  G T+          + G  K+     + 
Sbjct: 3   FTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTR--------DRRPGDAKLID--LRF 52

Query: 66  TFVDLGGLYAGENRSVVMVGSVLEKTYEEIDDSDLIIHIIDGSTDLFKSFEKLHHLLKFR 125
           T +D  GL   ++    + G +  +T   ID++D+ + +ID    L  + E L  +L+ R
Sbjct: 53  TIIDTAGL--EQSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLR-R 109

Query: 126 YRKPIIVVINKCD 138
             KP+++V NK +
Sbjct: 110 RGKPVVLVANKSE 122



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 2   EEHQFKIALVGPENSGKSSLVNSIFGKNISEVSEVGGTTKMPVKKFWGKIKIGKQKINPD 61
           E    ++A++G  N+GKS+L+N   G++        G T+  +   W          +  
Sbjct: 201 ETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITRDSISVEW----------DWR 250

Query: 62  FAKITFVDLGGLYAGENRSVVMVGSVLEK-----TYEEIDDSDLIIHIIDGSTDLFKSFE 116
              I   D  G+     R    V   LEK     +   I  ++ ++ + D +    K   
Sbjct: 251 GRTIKMFDTAGM-----RRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPFEKQDL 305

Query: 117 KLHHLLKFRYRKPIIVVINKCDLIENSKR--EDLRKYVEGRLEN----KAFFTSSNTYEG 170
           +L  L+  R  +  ++  NK DL+E+ +    DLR+  E  L      +A   S  T  G
Sbjct: 306 QLVDLV-IREGRAAVLAFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQTGYG 364

Query: 171 IGELLSTIIE 180
           +  L+ +II+
Sbjct: 365 LDRLMQSIID 374