Pairwise Alignments

Query, 456 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 479 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  145 bits (366), Expect = 3e-39
 Identities = 109/390 (27%), Positives = 187/390 (47%), Gaps = 14/390 (3%)

Query: 28  LALPSIGTEFSADTILLSWLVTSFLLASSALLLPFGRIADIIGRKRILLNGLLIFGLSSL 87
           +A+P I  EF        WLV++++LA    LL  GR AD+ GR+R+L+ GL +F L S+
Sbjct: 59  VAIPQIQQEFGMGAATAQWLVSAYILAFGGFLLLGGRCADLFGRRRVLVAGLAVFALVSV 118

Query: 88  MGIFSGSINHLILLRILQGIGSAMIFGTAIAILTSVYPLN-ERGKALGINIATVYIGLSL 146
            G F+     LI+ R ++G+ +      A+++LT+ +     R KA GI       G S 
Sbjct: 119 GGAFATDAGLLIVSRFVKGMAAGFTGPAAMSLLTTTFAEGPARNKAFGIFNLFEASGYSS 178

Query: 147 GPFLGGILTHYFGWRSIFLFSGITGIITYLIAKRFVLNEWCDAKGETFDYFGSITYIISL 206
           G  +GG+L     WR IF+      ++  L A R++  +   A+    D  G++T +  +
Sbjct: 179 GLLIGGLLA-ALDWRYIFVLPIPVAVLLLLAALRYLPPDAPRAERTRLDVGGAVTLLAGM 237

Query: 207 VFLVY--------GFITFTSGGSIFILASLLFGSIFIHREHKTENPILNIKLLTNNLAFS 258
           + LV+        G+ +  + G   +  +LL G  F+  E   + P++ + +  N     
Sbjct: 238 LLLVFTVVSAEEAGWASLRTVGGFVVAVALLAG--FVAIERSVKEPLVRLGIFRNR-GLV 294

Query: 259 MSNLAALLNYGATYAVAFLISFYLQSLRGFSAQDAGLILLAQPLVQAIFSPITGKLSDKV 318
            +N++A L YG      FLI+ YLQ+++G+      L+LL   L+  +  P  G L  + 
Sbjct: 295 AANISAALLYGGAAGFQFLIALYLQNIQGWKPWQMALVLLPAGLMVVVVGPKIGALISRF 354

Query: 319 EPRTLASLGMGITCIGLVLFSFIKLDTSIYQIILNL-VLLGFGFALFSSPNTNAIMSSVE 377
             R +   G+       +L   I  +  ++ ++L   VL G GFAL  S    A  S V 
Sbjct: 355 GVRRVLLAGLAAFVPCYLLMFGIGPEPDLWGVLLPASVLWGVGFALSISALMVAGTSGVA 414

Query: 378 RKFAGVASAMLATVRILGQMTSMAIITVLI 407
            +  G+A+ +L +   +G    +A++T  I
Sbjct: 415 DEEQGLAAGLLNSSLQVGGACGLAVLTAAI 444