Pairwise Alignments

Query, 456 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 457 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  196 bits (499), Expect = 1e-54
 Identities = 124/407 (30%), Positives = 205/407 (50%), Gaps = 8/407 (1%)

Query: 6   SIVAVVAAISSFLTPFMSTALNLALPSIGTEFSADTILLSWLVTSFLLASSALLLPFGRI 65
           +I+ +V  IS  +        N+ALP+I T+  A      W+V ++ +A    LL F  +
Sbjct: 17  AILTIVIGIS--MAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFL 74

Query: 66  ADIIGRKRILLNGLLIFGLSSLMGIFSGSINHLILLRILQGIGSAMIFGTAIAILTSVYP 125
            D+ G +RI   GL++F LSSL    S S+  L L R++QG G A +     A++  +YP
Sbjct: 75  GDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYP 134

Query: 126 LNERGKALGINIATVYIGLSLGPFLGGILTHYFGWRSIFLFSGITGIITYLIAKRFVLNE 185
               G+ +GIN   V +  + GP +   +     W+ +FL +   GII  L+A RF+   
Sbjct: 135 QRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPN 194

Query: 186 WCDAKGETFDYFGSITYIISLVFLVYGFITFTSGGSIFILAS-----LLFGSIFIHREHK 240
              A    FD   ++   ++   L+     F  G S+ ++A+     ++ G  FI R+  
Sbjct: 195 GSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLS 254

Query: 241 TENPILNIKLLTNNLAFSMSNLAALLNYGATYAVAFLISFYLQSLRGFSAQDAGLILLAQ 300
              P+L + LL   L FS+S   ++ ++ A       + FYLQ++ G S  + GL+L   
Sbjct: 255 LPVPLLPVDLLRIPL-FSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPW 313

Query: 301 PLVQAIFSPITGKLSDKVEPRTLASLGMGITCIGLVLFSFIKLDTSIYQIILNLVLLGFG 360
           PL   + +P+ G L ++V    L +LG+ I   GL     +    +   II  ++L G G
Sbjct: 314 PLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAG 373

Query: 361 FALFSSPNTNAIMSSVERKFAGVASAMLATVRILGQMTSMAIITVLI 407
           F LF SPN + I++S  R+ +G AS ML T R+LGQ +  A++ +++
Sbjct: 374 FGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML 420