Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 10/215 (4%)

Query: 36  GVFKYVPP-AVYEENGELKGYEVELISEIAERMDLKVEYKEYMFSDLLNAVANNEVDCAI 94
           GVF   PP      +G L+G+++EL + I  ++++K  +    F  ++ A+   + D  +
Sbjct: 30  GVFPEYPPFESVAADGSLQGFDIELGNAICAKLEVKCTWVHNEFDGMIPALRARKFDAIM 89

Query: 95  SDIAVTPEREKIVSFSRAYSKTDIILVVPKDSDI-EKLTDIIGQKVGVTAGTIDDDKSSE 153
           S +AVTP REKI+ FS     +   ++  K +D  +    ++G++VGV  G++ +  +  
Sbjct: 90  SSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFGDTPESLMGKQVGVLQGSLQEAYARA 149

Query: 154 LLKSIDFQVCRYNNHDELYDALESGNVDAIISE----ENNFESVQNSSI----NYLDEPI 205
            L  +  Q+  Y + D+ Y  L++G +DA +++    + NF S    S         +P 
Sbjct: 150 HLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKLEAQLNFLSKPEGSDFKTGPAFKDPT 209

Query: 206 ATVYCGIAVNKDNKELRLKINDIILELEQEGYFNQ 240
             +   + + K+++ LR  IN  I  ++ +G + Q
Sbjct: 210 LPLDIAMGLRKNDQALRALINKGIAAVQADGTYAQ 244