Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 7/203 (3%)

Query: 42  PPAVYEENGELKGYEVELISEIAERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTP 101
           PP  + ENG+  G++VEL+  I + +  K+E+ +  F  L+  + +   D A+S I +T 
Sbjct: 40  PPMEFVENGKRTGFDVELVEAIGKTLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITD 99

Query: 102 EREKIVSFSRAYSKTDIILVVPKDSD--IEKLTDIIGQKVGVTAGTIDDDKSSELLKSID 159
           ER+K+V F+  Y    ++++V KD +  I+   DI G+KV V  GT     + E    + 
Sbjct: 100 ERKKVVDFTVPYYAGGLVVMV-KDGNTAIKTPADINGKKVSVQVGTKSVSYTKEKFPQV- 157

Query: 160 FQVCRYNNHDELYDALESGNVDAIIS-EENNFESVQ-NSSINYLDEPIATVYCGIAVNKD 217
            Q+     + E+++ ++ G  DA ++ +   ++ V+    +  L E I T   G+A+ KD
Sbjct: 158 -QLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRGGLKVLPEQITTEEYGMAIRKD 216

Query: 218 NKELRLKINDIILELEQEGYFNQ 240
             EL   +N  I +L+ +G ++Q
Sbjct: 217 TPELTKAVNGAIEKLKADGTYDQ 239