Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 47/202 (23%), Positives = 98/202 (48%), Gaps = 3/202 (1%)

Query: 40  YVPPAVYEENGELKGYEVELISEIAERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAV 99
           Y P A   ++ ++ G+++++I+ IA++  LK++     F+ +  A+ N +VD  IS + +
Sbjct: 38  YAPFAFENKDKQIVGFDIDIINAIAKQQGLKIKIVNTPFTGIFGALNNGDVDLVISGVTI 97

Query: 100 TPEREKIVSFSRAYSKTDIILVVPKDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKSID 159
             +R++   F+  Y     ++ +PK+S +  L D+ G+K+ V + +  DD +S       
Sbjct: 98  NDKRKQSYDFTPPYFAARQLIALPKNSKVTSLKDLAGKKIAVVSASTADDIASREFGKTS 157

Query: 160 FQVCRYNNHDELYDALESGNVDAIISEEN--NFESVQNSSINYLDE-PIATVYCGIAVNK 216
             + R+ +   +   L  G VDA + +     +   QN  +  +D+        GI V K
Sbjct: 158 PDIRRFESTPLIISELAGGGVDAAMGDNGVIAYRVAQNPDLKTIDDKSFPEEGFGIVVKK 217

Query: 217 DNKELRLKINDIILELEQEGYF 238
            +K L  K+   +  +  +G +
Sbjct: 218 GDKALLDKLTAGLAAIRADGSY 239