Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  152 bits (383), Expect = 8e-42
 Identities = 87/241 (36%), Positives = 143/241 (59%), Gaps = 18/241 (7%)

Query: 5   VIFSVLLVITSCA-CISS-DSNTTTLKDGVLTVGVFKYVPPAVYEENGELKGYEVELISE 62
           VI S +L++TS + C SS      T+  GVLTVG+   +PP  Y E+GELKG++++L+ E
Sbjct: 8   VIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYYEDGELKGFDIDLMKE 67

Query: 63  IAERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDIILVV 122
           IA  M LK E+K Y +     A+ N E+DC +  + ++PER++ + FSRAY +T +++ V
Sbjct: 68  IANNMGLKPEFKIYEYGGAHEALLNGEIDC-LPSMTISPERKEDMDFSRAYIQTYVVVAV 126

Query: 123 PKDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKSIDFQVCRYNNHDELYDALESGNVDA 182
            ++S   +L D+ G+ + V   T  +D + E L S++  +  Y++ + L   + SGN+DA
Sbjct: 127 FENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVYSGNIDA 186

Query: 183 II---------SEENNFESVQNSSINYLDEPIATVYCGIAVNKDNKELRLKINDIILELE 233
           ++         S++NNFES        + E +   Y  IAV KDN  L+ +IND++ EL+
Sbjct: 187 VVTDQIQLDYYSKQNNFES------RLIFEKMTIEYWAIAVKKDNHNLQNEINDVLFELD 240

Query: 234 Q 234
           +
Sbjct: 241 E 241