Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  140 bits (354), Expect = 2e-38
 Identities = 82/235 (34%), Positives = 136/235 (57%), Gaps = 6/235 (2%)

Query: 5   VIFSVLLVITSCACISSDSNTTTLKDGVLTVGVFKYVPPAVYEENGELKGYEVELISEIA 64
           +I S + +I    C   +   T   + VLTVGV   + P  Y E+GE KG+EVELI EI+
Sbjct: 7   LIISTIFLIVFSGCTEDN---TGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEIS 63

Query: 65  ERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDIILVVPK 124
           +R+DL+ E+  Y FS+LL+AV+  EVDC I  I  TPER+  + FSR Y  T   ++V  
Sbjct: 64  KRLDLQPEFVVYSFSELLDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVRS 123

Query: 125 DSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKSIDFQVCRYNNHDELYDALESGNVDAII 184
           DS+   +  +  + VGV   +I++     LLKS+DF++  Y N +++ + L SG +D+ +
Sbjct: 124 DSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQNDINNDLLSGKIDSEV 183

Query: 185 SEE-NNFESVQ--NSSINYLDEPIATVYCGIAVNKDNKELRLKINDIILELEQEG 236
           ++   +   +Q  ++ +  + +    +Y  IA++  N EL+  I+  +LE+E +G
Sbjct: 184 TDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDG 238



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 23/123 (18%)

Query: 60  ISEIAERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDII 119
           +  + + MD K+   E   +D+ N + + ++D  ++D                   T + 
Sbjct: 150 LESLLKSMDFKIIIYENQ-NDINNDLLSGKIDSEVTDHI-----------------TSLY 191

Query: 120 LVVPKDSDIEKLTDIIGQKVGVTAGTID-DDKSSELLKSIDFQVCRYNNHDELYDALESG 178
           L+   D++++    I+G K  +    I  D+ + EL KSID  +    N   L    E  
Sbjct: 192 LIQDYDTELK----IVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTLVKLKEKW 247

Query: 179 NVD 181
           N+D
Sbjct: 248 NID 250