Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  117 bits (292), Expect = 3e-31
 Identities = 72/248 (29%), Positives = 134/248 (54%), Gaps = 28/248 (11%)

Query: 5   VIFSVLLVITSCACISSDSNTTTLKDGVLTVGVFKYVPPAVYEENGELKGYEVELISEIA 64
           ++FS+L++ ++C      S +     G LTVG++ Y+PP  Y EN +L+G+E+EL+SEIA
Sbjct: 8   LLFSILVITSACTDTKEYSES-----GTLTVGIYPYMPPYQYYENDKLEGFEIELVSEIA 62

Query: 65  ERMDLKVEYKEY--MFSDLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDIILVV 122
            RM+ ++E+ E    + + + A  +  VD +IS I  T  REK   +S  Y  +   LV 
Sbjct: 63  RRMNKQIEFVETDDKYGNYV-AARSGTVDVSISAITKTASREKDSIYSELYMNSYSSLVC 121

Query: 123 PKDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKSIDFQVCRYNNHDELYDALESGNVDA 182
             DS   +L D  G+K+G+   T+  D +    KS+DF++ +Y N+ +L  AL  G VD 
Sbjct: 122 -VDSKYSRLADFEGKKIGIVDDTVYVDHAESYKKSVDFEIVKYYNYYDLNSALLDGEVDG 180

Query: 183 IISE----------ENNFESVQNSSINYLDEPIATVYCGIAVNKDNKELRLKINDIILEL 232
            +++          +++   ++N+ I+Y          G+  +  N++L   I+++++ +
Sbjct: 181 ALADYFTCKYFMKNDDDLTIIENTDIHYF---------GMVSSIGNEDLINNIDEVLMSM 231

Query: 233 EQEGYFNQ 240
             +G + +
Sbjct: 232 YNDGSYEK 239