Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 911 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodanobacter sp000427505 FW510-R12

 Score =  121 bits (304), Expect = 1e-31
 Identities = 130/549 (23%), Positives = 233/549 (42%), Gaps = 83/549 (15%)

Query: 3   VTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVC 62
           V +  +  RYG+  AL ++  D+  G + G+IG  G GK++L+ ++ GV +  +G+IEV 
Sbjct: 12  VRLHGVGLRYGKTQALRDIDLDIPAGVMAGLIGPDGVGKSSLLALVSGVRALQDGRIEVL 71

Query: 63  GKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATEI 122
                     A  +    A   +    N+   L  +      G     +  E  +    +
Sbjct: 72  SGDMASARFRA-RVSPRIAYMPQVLGKNLYPTLSVMENVDFFGRLFGHDRAERARRIGTL 130

Query: 123 LKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQIL 182
           L   GL    D  +  LSGG KQ+  LG   A I+      +L+LDEP T   P S++  
Sbjct: 131 LAATGLAPFADRPAGKLSGGMKQK--LGLCCALIHDPE---LLVLDEPTTGVDPLSRRQF 185

Query: 183 LDVLKNI-NEKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKDTPEKVV-------- 232
             ++  I  E+ G++++V T ++ E  ++       ++ G+++   TP +++        
Sbjct: 186 WALIDGICAERPGMSVLVATGYMEEAGRF--DWLAAMDAGRVLATGTPAELLTHTGCSTL 243

Query: 233 -DEFLKDMVEAYDRLSKPTDKTVVEVEDASKRYYVVNGGETLNLKD------ISFKVKEK 285
              F+  + EA     +P +  V  V  A     +   G T+   D      ++F+++  
Sbjct: 244 EQAFIALLPEAQRAGYRPVE-IVPLVAGAETELAIEARGLTMRFGDFTAVDGVNFRIRRG 302

Query: 286 EILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMNLRRKIGIMHQEFS 345
           EI   LG +G GK+  +++L GL    +G   L G   K    + +  RR++G M Q FS
Sbjct: 303 EIFGFLGSNGCGKTTTMKMLTGLLPASEGEALLFG---KPLAPHDLATRRRVGFMTQSFS 359

Query: 346 LAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDK 405
           L   LT+ + L                                 +L  LPE ++  ++  
Sbjct: 360 LYSELTLRQNLVLHA-----------------------------RLFGLPEADLEPRVQ- 389

Query: 406 IGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEP 465
                        A    +D  ++L+AL          P  L  G++ R+++A+ +   P
Sbjct: 390 -------------AMANRFDLVDILDAL----------PDALPLGDRQRLSLAVAMIHGP 426

Query: 466 DILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKL 525
           +IL+LDEP   +DP+        L +++   G TI + +H +    E  DR  L+  G++
Sbjct: 427 EILILDEPTSGVDPVARDAFWRALIELSRRDGVTIFISTHFMN-EAERCDRIALMHAGRV 485

Query: 526 LMNGNPEEI 534
           L+   P+ I
Sbjct: 486 LVTDTPQAI 494



 Score = 89.7 bits (221), Expect = 4e-22
 Identities = 67/239 (28%), Positives = 124/239 (51%), Gaps = 25/239 (10%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+    LT R+G+  A+D V+F +++G+I G +G +G GKTT +K+L G+    EG+  
Sbjct: 275 LAIEARGLTMRFGDFTAVDGVNFRIRRGEIFGFLGSNGCGKTTTMKMLTGLLPASEGEAL 334

Query: 61  VCGKTENLREITAIH----LQRNFALWAEPAI-YNII--RKLYAVRTDSDEGLPLEEEME 113
           + GK     ++        + ++F+L++E  +  N++   +L+        GLP E ++E
Sbjct: 335 LFGKPLAPHDLATRRRVGFMTQSFSLYSELTLRQNLVLHARLF--------GLP-EADLE 385

Query: 114 EYRKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATM 173
              +       LV +    DA  + L  G++QRL L   +A I+   G  +L+LDEP + 
Sbjct: 386 PRVQAMANRFDLVDI---LDALPDALPLGDRQRLSLA--VAMIH---GPEILILDEPTSG 437

Query: 174 ACPASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVV 232
             P ++      L  ++ + GVTI +++H        C    L+  G++++ DTP+ +V
Sbjct: 438 VDPVARDAFWRALIELSRRDGVTIFISTHFMN-EAERCDRIALMHAGRVLVTDTPQAIV 495