Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 1e-33
 Identities = 138/567 (24%), Positives = 251/567 (44%), Gaps = 109/567 (19%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+    +  RYG++ AL +++F++  G   G+IG  GAGK++L+ ++ GV+   +G++ 
Sbjct: 4   LALQATGINHRYGQQQALVDITFNLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQDGQLN 63

Query: 61  VC-GKTENLREITAIHLQRNFA-------LWAEPAIYNIIRKLYAVRTDSDEGLPLEEEM 112
           V  G  E+ R   +++ +  F        L+ E +I   IR  +A      +    E+ M
Sbjct: 64  VLGGAIEDRRHRNSLYPRIAFMPQGLGGNLYPELSISENIR-FFATLFGLSKA-DCEQRM 121

Query: 113 EEYRKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPAT 172
                    +L    L    D  +  LSGG KQ+  LG   A I+  +   +L+LDEP T
Sbjct: 122 H-------NLLLSTDLARFADRPAGKLSGGMKQK--LGLCCALIHDPD---LLILDEPTT 169

Query: 173 MACPASKQILLDVLKNI-NEKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKD---- 226
              P S++   ++++++  E+  +T++V T+++ E  ++  + C++++ GK+I       
Sbjct: 170 GVDPLSRRRFWELVESVRGERPQLTLLVATAYMEEAEQF--EHCLMLDRGKLIADGLSSE 227

Query: 227 ----TPEKVVDE----FLKDMVEAYDRLSKP-----TDKTVVEVEDASKRYYVVNGGETL 273
               TP   +DE    F  +       L  P     T    +E  D + R+     G+  
Sbjct: 228 LADATPSGKLDEAFTHFQGNSAHGNQPLLIPPRESDTTDIAIEAHDLTLRF-----GDFT 282

Query: 274 NLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEG--IDLKDFGWNRM 331
            +  +SF +   EI   LG +G GK+  +++L GL    +G   L G  ++ KD     +
Sbjct: 283 AVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSATLLGNPVNAKD-----L 337

Query: 332 NLRRKIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQL 391
             R+++G M Q FSL   L+V + L                                 QL
Sbjct: 338 ATRKRVGFMSQSFSLYGELSVRQNLVLHA-----------------------------QL 368

Query: 392 LDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGE 451
            DLP+ E   ++D                       EL++  DL  +   +   EL  G 
Sbjct: 369 FDLPKAESGPRID-----------------------ELIQRFDLG-DVAEQPSGELPLGL 404

Query: 452 KVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIK 511
           + R+++A+ +   P++L+LDEP   +DP    +    L +++   G TI L +H +   +
Sbjct: 405 RQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLIELSREQGVTIFLSTHFMNEAQ 464

Query: 512 EISDRAILIDEGKLLMNGNPEEICEKF 538
              DR  L+  G++L    P+ +  +F
Sbjct: 465 R-CDRISLMHAGEVLACDTPDALQRQF 490



 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+   +LT R+G+  A++ VSF + +G+I G +G +G GKTT +K+L G+    EG   
Sbjct: 267 IAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSAT 326

Query: 61  VCGKTENLREITAI----HLQRNFALWAEPAI-YNIIRKLYAVRTDSDEGLPLEEEMEEY 115
           + G   N +++        + ++F+L+ E ++  N++  L+A   D    LP  E     
Sbjct: 327 LLGNPVNAKDLATRKRVGFMSQSFSLYGELSVRQNLV--LHAQLFD----LPKAESGPR- 379

Query: 116 RKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMAC 175
                E+++   L    +  S  L  G +QRL L      +   +   VL+LDEP +   
Sbjct: 380 ---IDELIQRFDLGDVAEQPSGELPLGLRQRLSLA-----VAVLHRPEVLILDEPTSGVD 431

Query: 176 PASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEF 235
           PA++     +L  ++ + GVTI +++H        C    L+  G+++  DTP+ +  +F
Sbjct: 432 PAARDDFWRLLIELSREQGVTIFLSTHFMN-EAQRCDRISLMHAGEVLACDTPDALQRQF 490

Query: 236 LKDMVEA 242
             D +EA
Sbjct: 491 HGDTLEA 497