Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  123 bits (309), Expect = 2e-32
 Identities = 125/552 (22%), Positives = 237/552 (42%), Gaps = 89/552 (16%)

Query: 15  KVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVE----SFDEGKIEVCGKTENLRE 70
           K  +  +SFD+  G+++GI+G+SG+GKT   + L G+         G I   G+      
Sbjct: 23  KALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRTAGSIVFDGQEVTALS 82

Query: 71  ITAIHLQRNFAL---WAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDA--TEILKL 125
             A+   R   +   + EP     +    A+    DEGL L   +   ++ A   E+L+ 
Sbjct: 83  AGALRKLRGSRIGMVFQEP--MTSLNPSMAIGRQLDEGLALHTTLSPAQRRARILEMLER 140

Query: 126 VGLEHKK---DAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQIL 182
           V ++       AY +  SGG +QR++L   +          +L+ DEP T      ++ +
Sbjct: 141 VRIQDPAAALSAYPHRFSGGMRQRIMLASAMLL-----RPSLLIADEPTTALDAVVQREV 195

Query: 183 LDVLKNINEKLGVTIIVTSH-LPEIHKYLCKSCILIENGKIIMKDTPEKVVDEFLKDMVE 241
           +D++  +    G  +++ SH LP + +Y  +  +++ +G+I+  +    +V    +D   
Sbjct: 196 MDLMVELTRDHGTAVLMISHDLPMVARYTDR-MVVMHHGRIVESNRTAALVSAPREDYTR 254

Query: 242 AYDRLSKPTDKTVVEVEDASKRYYVVN-------GGETLN-------LKDISFKVKEKEI 287
                + PT   V E+  A+    V         GG  L+       LK I  ++   E+
Sbjct: 255 KL-LAAMPTRGPVREIPQAAPILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEV 313

Query: 288 LSILGPSGTGKSVILRLLAGLEAPDKGVVKLE--GIDLKDFGWNRMNLRRKIGIMHQEFS 345
           ++++G SG+GK+ + R +AGL  P  G +  E  GI  +  GW R   + ++       S
Sbjct: 314 VALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEGWARYRAQCQMVFQDPASS 373

Query: 346 LAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDK 405
           L   +TV                       A +G      + L  +  L     R ++ +
Sbjct: 374 LDPRMTV----------------------GASIG------EALTGMPGLTPAARRGRILE 405

Query: 406 IGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEP 465
           +                       L+ + L  E  ++ P ELSGG++ RVA+A  +   P
Sbjct: 406 V-----------------------LQEVSLPAEVASRYPHELSGGQRQRVAIARAVVRRP 442

Query: 466 DILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKL 525
             ++ DEP   LD     ++     ++    G + + ISH + ++++I+DR I++  G++
Sbjct: 443 AFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEI 502

Query: 526 LMNGNPEEICEK 537
           +  G  +E+ ++
Sbjct: 503 VEQGPRDEVFDR 514



 Score = 51.6 bits (122), Expect = 8e-11
 Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 15  KVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGKTENLR-EITA 73
           K AL  +   +  G+++ ++G SG+GKTTL + + G+     G+I   GK    R E  A
Sbjct: 298 KRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEGWA 357

Query: 74  IHLQRNFALWAEPAIYNIIRKLYAVRT-DSDEGLPLEEEMEEYRKDATEILKLVGLEHK- 131
            +  +   ++ +PA     R        ++  G+P        R    E+L+ V L  + 
Sbjct: 358 RYRAQCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAAR-RGRILEVLQEVSLPAEV 416

Query: 132 KDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQILLDVLKNINE 191
              Y + LSGG++QR+ + R + +  A      ++ DEP +      +  +L++   +  
Sbjct: 417 ASRYPHELSGGQRQRVAIARAVVRRPA-----FIVADEPVSALDVTVRAQILELFAQLQS 471

Query: 192 KLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVD----EFLKDMVEAYDRL 246
           + G + +  SH   + + +    I++ +G+I+ +   ++V D    ++ ++++ A  R+
Sbjct: 472 RHGFSCLFISHDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAAPRM 530