Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 1e-38
 Identities = 136/569 (23%), Positives = 250/569 (43%), Gaps = 91/569 (15%)

Query: 3   VTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKT-TLIKILRGVESFD-EGKIE 60
           + V+ L   +G K  +  + F +  G+ L ++G+SG+GKT T + +LR V++ D  G+  
Sbjct: 13  IDVKGLRVAFGGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADVTGEAR 72

Query: 61  VCGKTENL----------REITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEE 110
           + G               RE+  I  +    ++ EP     +  LY+V     E L L E
Sbjct: 73  LYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPM--TALNALYSVGDQIAEVLELHE 130

Query: 111 EMEEYRKDATEILKLVGL-----EHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVL 165
            +      A  +  L          +  A+ + LSGG++QR ++   LA         +L
Sbjct: 131 ALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALAC-----KPRLL 185

Query: 166 LLDEPATMACPASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKII-- 223
           L DEP T      +  +LD+L ++  K G+ +++ +H   + +      +++ENG ++  
Sbjct: 186 LADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEH 245

Query: 224 -----MKDTPEKVVDEFLKDMVEAYDRLSKPTDKTVVEVEDASKRYYV-------VNG-- 269
                + D P+      L D     D  +       V V +A     +       + G  
Sbjct: 246 GAVAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWF 305

Query: 270 --GETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFG 327
             GE + ++   F++   E L ++G SG+GKS +     GL    +G +K+ G D     
Sbjct: 306 RKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGL-LKHQGALKIAGKDWAVDR 364

Query: 328 WNRMNLRRKIGIMHQE--FSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMV 385
            + + LRR + ++ Q+   SL+  +TV +++            E  ++ A ELG+  +  
Sbjct: 365 ASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVG-----------EGLRVHAPELGVEARRA 413

Query: 386 DGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPT 445
             L  L D+  TE +                FP+                    L++ P 
Sbjct: 414 RSLAALADVGLTESQ----------------FPS-------------------LLDRYPH 438

Query: 446 ELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISH 505
           E SGG++ R+A+A  L ++P +L+LDEP   LD    ++V   L+++    G + +LI+H
Sbjct: 439 EFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQRLQRERGLSYLLITH 498

Query: 506 HVELIKEISDRAILIDEGKLLMNGNPEEI 534
            VE+I+ ++ + I++ +G +L  G  E +
Sbjct: 499 DVEVIRAMAHQVIVMKDGAILETGPVERV 527



 Score = 71.2 bits (173), Expect = 9e-17
 Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 17/231 (7%)

Query: 11  RYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGKTENLRE 70
           R GE VA+    F +  G+ LG++G+SG+GK+TL     G+    +G +++ GK   +  
Sbjct: 306 RKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLK-HQGALKIAGKDWAVDR 364

Query: 71  ITAIHLQRNF-ALWAEPAIYNIIRKLYAVRTDSDEGLPL---EEEMEEYRKDATEILKLV 126
            + + L+R    ++ +P  ++ +     V     EGL +   E  +E  R  +   L  V
Sbjct: 365 ASDLGLRRVMQVVFQDP--FSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADV 422

Query: 127 GLEHKK-----DAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQI 181
           GL   +     D Y +  SGG++QRL + R L          +L+LDEP +      ++ 
Sbjct: 423 GLTESQFPSLLDRYPHEFSGGQRQRLAIARALIV-----DPQLLVLDEPTSALDVTIQKQ 477

Query: 182 LLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVV 232
           +L +L+ +  + G++ ++ +H  E+ + +    I++++G I+     E+V+
Sbjct: 478 VLGLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVL 528