Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  119 bits (299), Expect = 2e-31
 Identities = 126/573 (21%), Positives = 248/573 (43%), Gaps = 110/573 (19%)

Query: 3   VTVENLTKRYGE--KVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGV--------- 51
           V+VE LT   G   +  + NVSFD+  G+++GI+G+SG+GKT   + + G+         
Sbjct: 12  VSVEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTA 71

Query: 52  -ESFDEGKIEVCGKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEE 110
                EG+     K   LRE+    +   F    EP        + ++      G  L E
Sbjct: 72  GRILFEGEDLTQAKPARLRELRGARVGMVF---QEP--------MTSLNPSMTIGKQLVE 120

Query: 111 EMEEYRKDAT---------EILKLVGLEHKK---DAYSNILSGGEKQRLILGRQLAKIYA 158
            +  +R+D +         ++L  VG+   K   DA+ +  SGG +QR++L   +    A
Sbjct: 121 ALALHRRDLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPA 180

Query: 159 KNGDGVLLLDEPATMACPASKQILLDVLKNINEKLGVTIIVTSH-LPEIHKYLCKSCILI 217
                +L+ DEP T      ++ +L+++  +  +    +++ SH LP + ++  +  +++
Sbjct: 181 -----LLIADEPTTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARF-TQRMVVM 234

Query: 218 ENGKIIMKDTPEKVVD--------EFLKDMVEAYDRLSKPTDKTVVEVED-----ASKRY 264
            +G+++     + +++        E L+ M         P +  VVEV +     A  R 
Sbjct: 235 RHGEVMETGRTDDMLEQPRHAYTRELLQAMPHRLPARQVPDEAPVVEVRNLVVDYAGHRR 294

Query: 265 YVVNGGETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEG--ID 322
                     L  I   V+ +E+++++G SG+GK+ + R +AGL  P  G +   G  I 
Sbjct: 295 LFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPIL 354

Query: 323 LKDFGWNRMNLRRKIGIMHQEFSLAHYLTVNELLKYRLG-VKSIETVESAKLKAAELGIS 381
             D GW+   L+ ++       SL   +T+ +L+   L  VK + T + A+         
Sbjct: 355 RSDAGWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRAR--------- 405

Query: 382 PKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLN 441
                            ++  L+++G+      +          A+E             
Sbjct: 406 ----------------RVQEVLEEVGLGTGFAPRY---------AHE------------- 427

Query: 442 KKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTII 501
                LSGG++ RVA+A  +   P  ++ DEP   LD     +V     ++    G + +
Sbjct: 428 -----LSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCL 482

Query: 502 LISHHVELIKEISDRAILIDEGKLLMNGNPEEI 534
            ISH + ++++++DR +++ +G+++  G+ + +
Sbjct: 483 FISHDLGVVEQVADRVVVMQDGRIVEQGSRDTV 515



 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 57/277 (20%)

Query: 269 GGETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPD----KGVVKLEGIDLK 324
           GG  + ++++SF +   E++ I+G SG+GK+   R + GL  P      G +  EG DL 
Sbjct: 24  GGREI-VRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTAGRILFEGEDLT 82

Query: 325 DFGWNRMNLRR--KIGIMHQE--FSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGI 380
                R+   R  ++G++ QE   SL   +T+ + L           VE+  L   +L  
Sbjct: 83  QAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQL-----------VEALALHRRDLSP 131

Query: 381 SPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETL 440
           + +      ++LD+        L ++GI +                          K  L
Sbjct: 132 AARRE----RILDM--------LARVGIRDP-------------------------KGAL 154

Query: 441 NKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTI 500
           +  P E SGG + R+ +A  + LEP +L+ DEP   LD +  R+V   +  +     T +
Sbjct: 155 DAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDAVVQRDVLELMVGLTREHRTAV 214

Query: 501 ILISHHVELIKEISDRAILIDEGKLLMNGNPEEICEK 537
           ++ISH + ++   + R +++  G+++  G  +++ E+
Sbjct: 215 LMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQ 251



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 27/236 (11%)

Query: 15  KVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGKTENLREITAI 74
           K AL  +   V+  +++ ++G SG+GKTTL + + G+     G+I   G+          
Sbjct: 302 KRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRP--------- 352

Query: 75  HLQRNFALWAEPAI---------YNIIRKLYAVRTDSDEGLPLEEEME--EYRKDATEIL 123
            + R+ A W++  +         Y  +     +     EGL L + M   +  +   E+L
Sbjct: 353 -ILRSDAGWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVL 411

Query: 124 KLVGLEHK-KDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQIL 182
           + VGL       Y++ LSGG++QR+ + R + +  A      ++ DEP +      +  +
Sbjct: 412 EEVGLGTGFAPRYAHELSGGQRQRVAIARAIVRRPA-----FVIADEPVSALDVTVRAQV 466

Query: 183 LDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEFLKD 238
           L +   + ++ G + +  SH   + + +    +++++G+I+ + + + V D   +D
Sbjct: 467 LALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQD 522