Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  129 bits (324), Expect = 5e-34
 Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 108/566 (19%)

Query: 2   AVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEV 61
           A+ +E+L+ RYG  +AL+ VS  + KG    ++G  G GK+TL+ ++ GV+    G++ V
Sbjct: 12  AIRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSV 71

Query: 62  CGKTENLREITAIHLQRNFALWAEPAIYNIIRKLY---AVRTDSD-----EGLPLEEEME 113
            G      ++T    +  F          + R LY   +VR + D      GL   E   
Sbjct: 72  LG-----FDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREA 126

Query: 114 EYRKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATM 173
             R+    +L   GL    D  +  LSGG KQ+L L   L      +   +L+LDEP T 
Sbjct: 127 HMRR----LLDATGLAPFPDRPAGKLSGGMKQKLGLCCSLV-----HDPDLLILDEPTTG 177

Query: 174 ACPASKQILLDVLKNI-NEKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMK-DTPEK 230
             P S++   +++  +  E+  +T++V T+++ E  ++     + +++GK+I + DT E 
Sbjct: 178 VDPLSRRQFWELVDAMCAERPDMTVLVSTAYMEEAERF--GHLVAMDDGKVIAQGDTREI 235

Query: 231 VVDEFLKDMVEAYDRLSKPTDK------------------TVVEVEDASKRYYVVNGGET 272
           + D     +  AY RL  P DK                    +E  D ++R+     G+ 
Sbjct: 236 MRDAGADTLEAAYVRL-LPQDKRPSGDALVVPAWQDKGEAPAIEAHDLTRRF-----GDF 289

Query: 273 LNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMN 332
           + +  +SF++   EI   LG +G GK+  +++L GL     G   L G   +      M 
Sbjct: 290 VAVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDATDGTASLFG---RPIAPGDME 346

Query: 333 LRRKIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLL 392
            R ++G M Q FSL   L+V + L     +  +   ++ +L +A L              
Sbjct: 347 TRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELVSAALA------------- 393

Query: 393 DLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEK 452
              + E+    D +                                     P  L  G +
Sbjct: 394 ---QFELEAHADAV-------------------------------------PAALPLGIR 413

Query: 453 VRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKE 512
            R+ +A      P+IL+LDEP   +DP        +L +++   G TI + +H +    E
Sbjct: 414 QRLQLAAACLHRPEILILDEPTSGVDPAARDMFWRHLIRLSRDEGVTIFVSTHFMN-EAE 472

Query: 513 ISDRAILIDEGKLLMNGNPEEICEKF 538
             DR  L+  G++L  G P E+ +++
Sbjct: 473 RCDRISLMHRGRVLTVGAPTELTQRY 498