Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 3e-32
 Identities = 133/566 (23%), Positives = 244/566 (43%), Gaps = 109/566 (19%)

Query: 2   AVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEV 61
           A+  E ++ RYG+ +AL  + F +  G    +IG  GAGK+TL+ ++ GV+   +G+++V
Sbjct: 5   ALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQV 64

Query: 62  C-GKTENLREITAIHLQRNFA-------LWAEPAIYNIIRKLYAVRTDSDEGLPLEEEME 113
             G     R  TA++ +  F        L+ E +I   IR    +      GL       
Sbjct: 65  LGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATL-----FGL----GRR 115

Query: 114 EYRKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATM 173
           E  +    +L+   L+H     +  LSGG KQ+  LG   A I+  +   +L+LDEP T 
Sbjct: 116 ECEQRMANLLQATDLQHFAQRPAGKLSGGMKQK--LGLCCALIHEPD---LLILDEPTTG 170

Query: 174 ACPASKQILLDVLKNIN-EKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKDTPEKV 231
             P S++   ++++ +  ++  +T++V T+++ E  ++  + C++++ G+++      ++
Sbjct: 171 VDPLSRRRFWELVEQVRAQRPQLTLLVATAYMEEAEQF--EHCLMLDGGRLLAAGPSHEL 228

Query: 232 V----DEFLKDMVEAYDRLSK------------PTDKTV-VEVEDASKRYYVVNGGETLN 274
                   L D    Y    K             TD  V +E  D + R+     G+   
Sbjct: 229 AAVTSSGKLDDAFTHYQGAGKAQHQPLAIPPRQATDGPVAIEAHDLTLRF-----GDFTA 283

Query: 275 LKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEG--IDLKDFGWNRMN 332
           +  +SF +   EI   LG +G GK+  +++L GL    +G   L G  +D  D     + 
Sbjct: 284 VNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASLLGRPVDASD-----LA 338

Query: 333 LRRKIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLL 392
            R+++G M Q FSL   L+  + L                                 +L 
Sbjct: 339 TRKRVGFMSQSFSLYGELSTRQNLALHA-----------------------------RLF 369

Query: 393 DLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEK 452
           DLP+ E   ++D                       EL+E  DL     ++    L  G +
Sbjct: 370 DLPKAESAQRID-----------------------ELIERFDL-AAIADQPSGALPLGLR 405

Query: 453 VRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKE 512
            R+++A+ +   P++L+LDEP   +DP    +    L +++   G TI L +H +   + 
Sbjct: 406 QRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTHFMNEAQR 465

Query: 513 ISDRAILIDEGKLLMNGNPEEICEKF 538
             DR  L+  G++L    P+ +  ++
Sbjct: 466 -CDRISLMHAGRVLACDTPDALQHQY 490



 Score = 87.0 bits (214), Expect = 3e-21
 Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 28/269 (10%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+   +LT R+G+  A++ VSF + +G+I G +G +G GKTT +K+L G+    EG   
Sbjct: 267 VAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSAS 326

Query: 61  VCGKTENLREITAI----HLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYR 116
           + G+  +  ++        + ++F+L+ E +    +  L+A   D    LP  E  +   
Sbjct: 327 LLGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNL-ALHARLFD----LPKAESAQR-- 379

Query: 117 KDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACP 176
               E+++   L    D  S  L  G +QRL L      +   +   VL+LDEP +   P
Sbjct: 380 --IDELIERFDLAAIADQPSGALPLGLRQRLSLA-----VAVLHRPEVLILDEPTSGVDP 432

Query: 177 ASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTP-------- 228
           A++     +L  ++ + GVTI +++H        C    L+  G+++  DTP        
Sbjct: 433 AARDDFWRLLVELSREQGVTIFLSTHFMN-EAQRCDRISLMHAGRVLACDTPDALQHQYQ 491

Query: 229 -EKVVDEFLKDMVEAYDRLSKPTDKTVVE 256
            + + D F++ + +A +     TD  V+E
Sbjct: 492 GDTLEDAFVRCLEQAQELAPAATDSNVLE 520