Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 535 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

 Score =  130 bits (327), Expect = 1e-34
 Identities = 125/555 (22%), Positives = 238/555 (42%), Gaps = 81/555 (14%)

Query: 3   VTVENLTKRYGE----KVALDNVSFDVKKGDILGIIGKSGAGKTT----LIKILRGVESF 54
           ++VENLT  Y      +  + NVSF + +G++L  +G+SG+GKTT    +I +L      
Sbjct: 4   LSVENLTISYRTARQWREVVHNVSFTLGRGEMLAFVGESGSGKTTTAQAIIGLLADNARR 63

Query: 55  DEGKIEVCGKTENLREITAIHLQRNFALWAEPAIY-NIIRKLYAVRTDSDEGLPLEEEME 113
           D GKI + G+  +      +   R   +   P    N +  +  +     E + L +++ 
Sbjct: 64  DAGKISLNGEEISRWSAKRLDTLRGARISLVPQDPGNSLNPVKTIGVQVGEIIQLHQKVT 123

Query: 114 EYRKD--ATEILKLVGLEHKKDA---YSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLD 168
             ++D     +L  VGL H +     Y + LSGG KQR+++   +A         V++ D
Sbjct: 124 RAQRDEQVLALLTKVGLSHPEQRMTQYPHQLSGGMKQRVLIAIAIAL-----RPDVIVAD 178

Query: 169 EPATMACPASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKI------ 222
           EP +      ++ +LD+L  +  + G  ++  +H   +        ++  +G++      
Sbjct: 179 EPTSALDVTVQKRILDLLDILRRESGTAVLFVTHDLALAAQRADRLLVFRDGEVQEQGNT 238

Query: 223 --IMKDTPEKVVDEFLKDM----VEAYDRLSKPTDKTVVEVEDASKRYYVVNGGETLNLK 276
             I++        + L D+    +       +P     +     SK++ +  G +   L 
Sbjct: 239 ADIVRTPQHAYTRQLLSDLQGQRLTIAPVAGRPLASPAIRARAISKQFSLGKGHQLQALD 298

Query: 277 DISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWN-RMNLRR 335
            ++F V+     +++G SG+GK+ + R+L G E  D G V ++ ID        R  LR+
Sbjct: 299 RVTFDVRRGSTHALVGESGSGKTTLARILLGFEQADSGQVIIDDIDATALSREARRQLRQ 358

Query: 336 KIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLP 395
           KI  ++Q    +                                     +D    L D+ 
Sbjct: 359 KIQFVYQNPFAS-------------------------------------LDPRQTLFDII 381

Query: 396 ETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRV 455
           E  ++N   ++G +E  +R              + + + L  E L +   ELSGG++ RV
Sbjct: 382 EEPLKN-FSRLGKTERKLR-----------VETVAQRVALPVELLTRTARELSGGQRQRV 429

Query: 456 AMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISD 515
           A+A  L LEP IL+LDE    LD     ++   L+++   +G T + I+H +  ++ I+ 
Sbjct: 430 AIARALILEPTILVLDEATSALDVTVQAQILALLQQLQQQLGLTYLFITHDLSTVRRIAH 489

Query: 516 RAILIDEGKLLMNGN 530
              ++  G+++  G+
Sbjct: 490 SVTVLRSGQVVEQGD 504



 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 54/288 (18%)

Query: 253 TVVEVEDASKRYYVVNGGETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAP- 311
           TV+ VE+ +  Y        + + ++SF +   E+L+ +G SG+GK+   + + GL A  
Sbjct: 2   TVLSVENLTISYRTARQWREV-VHNVSFTLGRGEMLAFVGESGSGKTTTAQAIIGLLADN 60

Query: 312 ---DKGVVKLEGIDLKDFGWNRMNLRR--KIGIMHQEFSLAHYLTVNELLKYRLGVKSIE 366
              D G + L G ++  +   R++  R  +I ++ Q+                    S+ 
Sbjct: 61  ARRDAGKISLNGEEISRWSAKRLDTLRGARISLVPQDPG-----------------NSLN 103

Query: 367 TVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDA 426
            V++  ++  E+                   ++  K+ +    E V+  L          
Sbjct: 104 PVKTIGVQVGEI------------------IQLHQKVTRAQRDEQVLALLTKV------- 138

Query: 427 NELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVS 486
                 L   ++ + + P +LSGG K RV +A+ +AL PD+++ DEP   LD    + + 
Sbjct: 139 -----GLSHPEQRMTQYPHQLSGGMKQRVLIAIAIALRPDVIVADEPTSALDVTVQKRIL 193

Query: 487 NYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGNPEEI 534
           + L  +    GT ++ ++H + L  + +DR ++  +G++   GN  +I
Sbjct: 194 DLLDILRRESGTAVLFVTHDLALAAQRADRLLVFRDGEVQEQGNTADI 241



 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 34/254 (13%)

Query: 17  ALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGKTENLREITAIHL 76
           ALD V+FDV++G    ++G+SG+GKTTL +IL G E  D G++ +        +I A  L
Sbjct: 296 ALDRVTFDVRRGSTHALVGESGSGKTTLARILLGFEQADSGQVII-------DDIDATAL 348

Query: 77  QRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATEILKLVGLEHKKDAYS 136
            R         I  + +  +A     D    L + +EE  K+ + + K       +    
Sbjct: 349 SREARRQLRQKIQFVYQNPFA---SLDPRQTLFDIIEEPLKNFSRLGKTERKLRVETVAQ 405

Query: 137 NI-------------LSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQI-L 182
            +             LSGG++QR+ + R L          +L+LDE AT A   + Q  +
Sbjct: 406 RVALPVELLTRTARELSGGQRQRVAIARALIL-----EPTILVLDE-ATSALDVTVQAQI 459

Query: 183 LDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVV----DEFLKD 238
           L +L+ + ++LG+T +  +H     + +  S  ++ +G+++ +     +     +++ ++
Sbjct: 460 LALLQQLQQQLGLTYLFITHDLSTVRRIAHSVTVLRSGQVVEQGDVGTLFASPQNDYTRE 519

Query: 239 MVEAYDRLSKPTDK 252
           +++A    S  T++
Sbjct: 520 LIDAIPHFSPATEE 533