Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  136 bits (342), Expect = 4e-36
 Identities = 141/544 (25%), Positives = 242/544 (44%), Gaps = 91/544 (16%)

Query: 12  YGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCG---KTENL 68
           +G  VAL ++S ++  G ++G+IG  G GK++L+ ++ G  +  +G +EV          
Sbjct: 27  FGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNVEVLAGDMSDPRH 86

Query: 69  REITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATEILKLVGL 128
           RE T   +    A   +    N+   L         G    ++  E +    E+LK  GL
Sbjct: 87  REDTCPRI----AYMPQGLGKNLYPTLSVFENIDFFGRLFGQDGRERKARIAELLKSTGL 142

Query: 129 EHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQILLDVLKN 188
           E   D  +  LSGG KQ+  LG   A I+  +   +L+LDEP T   P S++   +++ +
Sbjct: 143 ERFADRPAMKLSGGMKQK--LGLCCALIHDPD---LLILDEPTTGVDPLSRRQFWELIDS 197

Query: 189 INE-KLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEFLKDMVEA--YD 244
           I   + G+++IV T+++ E   +     + ++ GKI+   +P ++++      ++A    
Sbjct: 198 IRAGRPGMSVIVATAYMEEAAGF--DWLVAMDGGKILATGSPGELLERTSTANLDAAFIA 255

Query: 245 RLSKPTDKTVVEVEDASKRY-----YVVNG-------GETLNLKDISFKVKEKEILSILG 292
            L +   K   EV  A +R      Y +         G+   + ++SFK+   EI   LG
Sbjct: 256 LLPEEKRKDYHEVHIAPRRVTHDGDYAIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFLG 315

Query: 293 PSGTGKSVILRLLAGLEAPDKGVVKLEG--IDLKDFGWNRMNLRRKIGIMHQEFSLAHYL 350
            +G GKS  +++L GL A  +G  KL G  +D  D     M +R ++G M Q FSL   L
Sbjct: 316 SNGCGKSTTMKMLTGLLAASEGEAKLFGHKVDASD-----MAIRHRVGYMSQAFSLYSEL 370

Query: 351 TVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISE 410
           TV + L                             D   +L  LPE  ++ +     I+E
Sbjct: 371 TVRQNL-----------------------------DLHARLFKLPEATIQPR-----IAE 396

Query: 411 MVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLL 470
           M  R         +D   +++ L          P +L  G + R+++A+ +   PDIL+L
Sbjct: 397 MAER---------FDLGTVMDTL----------PDDLPLGIRQRLSLAVAMIHSPDILIL 437

Query: 471 DEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGN 530
           DEP   +DP+        L  ++     TI + +H +    E  DR  L+  GK+L++  
Sbjct: 438 DEPTSGVDPVARDGFWQILADLSRNDNVTIFISTHFMN-EAERCDRISLMHAGKVLISDT 496

Query: 531 PEEI 534
           P+ I
Sbjct: 497 PDAI 500



 Score = 84.3 bits (207), Expect = 2e-20
 Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 25/251 (9%)

Query: 2   AVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEV 61
           A+   +L+ R+G+  A+DNVSF + +G+I G +G +G GK+T +K+L G+ +  EG+ ++
Sbjct: 282 AIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFLGSNGCGKSTTMKMLTGLLAASEGEAKL 341

Query: 62  CGKTENLREITAIH----LQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEME-EYR 116
            G   +  ++   H    + + F+L++E            VR + D    L +  E   +
Sbjct: 342 FGHKVDASDMAIRHRVGYMSQAFSLYSE----------LTVRQNLDLHARLFKLPEATIQ 391

Query: 117 KDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACP 176
               E+ +   L    D   + L  G +QRL L   +A I++ +   +L+LDEP +   P
Sbjct: 392 PRIAEMAERFDLGTVMDTLPDDLPLGIRQRLSLA--VAMIHSPD---ILILDEPTSGVDP 446

Query: 177 ASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVD--- 233
            ++     +L +++    VTI +++H        C    L+  GK+++ DTP+ +     
Sbjct: 447 VARDGFWQILADLSRNDNVTIFISTHFMN-EAERCDRISLMHAGKVLISDTPDAITKSRN 505

Query: 234 -EFLKDMVEAY 243
            E L++   AY
Sbjct: 506 AETLEEAFVAY 516



 Score = 53.9 bits (128), Expect = 3e-11
 Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 3/111 (2%)

Query: 428 ELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSN 487
           ELL++  L +   ++   +LSGG K ++ +   L  +PD+L+LDEP   +DPL+ R+   
Sbjct: 135 ELLKSTGLERFA-DRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWE 193

Query: 488 YLKKIN-DTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGNPEEICEK 537
            +  I     G ++I+ + ++E      D  + +D GK+L  G+P E+ E+
Sbjct: 194 LIDSIRAGRPGMSVIVATAYMEEAAGF-DWLVAMDGGKILATGSPGELLER 243