Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 341 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  120 bits (301), Expect = 8e-32
 Identities = 75/275 (27%), Positives = 142/275 (51%), Gaps = 63/275 (22%)

Query: 275 LKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMNLR 334
           ++D+S  ++  E+L++LGPSG+GK+ ILR++AGLE  D G +     D  +         
Sbjct: 18  VRDVSLDIESGELLALLGPSGSGKTTILRMVAGLEYSDGGRIFFGDEDATNIPVRD---- 73

Query: 335 RKIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDL 394
           R +G + Q ++L  ++T++E + + + V  ++  ++A                    +D 
Sbjct: 74  RGVGFVFQHYALFPHMTLHENIAFGMKVSKVKRDKAA--------------------IDA 113

Query: 395 PETEMRN--KLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEK 452
              E+ N  KLD +G                                 ++ P ++SGG++
Sbjct: 114 RVKELLNLVKLDGLG---------------------------------DRFPAQISGGQR 140

Query: 453 VRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKE 512
            RVA+A  L+++P +LLLDEPFG LD    R++  +L++I+D++G T I ++H  E   +
Sbjct: 141 QRVALARALSVDPKVLLLDEPFGALDANVRRDLRRWLREIHDSLGITTIFVTHDQEEALD 200

Query: 513 ISDRAILIDEGKLLMNGNPEEICEKFIERSNSKFM 547
           ++DR +++++G ++  G P+E+C     + NS F+
Sbjct: 201 LADRVVILNQGGIVQQGTPKEVC----RQPNSSFV 231



 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 15/234 (6%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKI- 59
           M + +EN+ K +    A+ +VS D++ G++L ++G SG+GKTT+++++ G+E  D G+I 
Sbjct: 1   MKIRLENVVKTFDTFRAVRDVSLDIESGELLALLGPSGSGKTTILRMVAGLEYSDGGRIF 60

Query: 60  --EVCGKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRK 117
             +       +R+     + +++AL+    ++  I     V     +   ++  ++    
Sbjct: 61  FGDEDATNIPVRDRGVGFVFQHYALFPHMTLHENIAFGMKVSKVKRDKAAIDARVK---- 116

Query: 118 DATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPA 177
              E+L LV L+   D +   +SGG++QR+ L R L+         VLLLDEP       
Sbjct: 117 ---ELLNLVKLDGLGDRFPAQISGGQRQRVALARALSV-----DPKVLLLDEPFGALDAN 168

Query: 178 SKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKV 231
            ++ L   L+ I++ LG+T I  +H  E    L    +++  G I+ + TP++V
Sbjct: 169 VRRDLRRWLREIHDSLGITTIFVTHDQEEALDLADRVVILNQGGIVQQGTPKEV 222