Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  135 bits (339), Expect = 5e-36
 Identities = 128/549 (23%), Positives = 249/549 (45%), Gaps = 88/549 (16%)

Query: 13  GEKVALDNVSFDVKKGDILGIIGKSGAGKT----TLIKILRGVESFDEGKIEVCGK---T 65
           G +V  D VSFD+  G+I GI+G+SG+GKT     LI +L    +   G +   G+   +
Sbjct: 20  GHRVVKD-VSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIAVTGGSVIYKGQDVMS 78

Query: 66  ENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEM--EEYRKDATEIL 123
              RE+  +       ++ EP     +     +    +EGL L  ++  EE R+   E+L
Sbjct: 79  LPARELRRLRGAEIGVVFQEPM--TSLNPSMTIGRQLEEGLILHTKLSPEERREKILEML 136

Query: 124 KLVGLEHKKDA---YSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQ 180
           + VG+   + A   Y +  SGG +QR++L   +    A     +L+ DEP T      ++
Sbjct: 137 RRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPA-----LLIADEPTTALDAVIQR 191

Query: 181 ILLDVLKNINEKLGVTIIVTSH-LPEIHKYLCKSCILIENGKIIMKDTPEKVVDE----F 235
            +++++  +    G  +++ SH LP + +Y  +  +++E G I+ +   E ++D     +
Sbjct: 192 DVMELMVELTRAEGTAVLLISHDLPMVARYTSR-IVVMEKGAIVEQGRTEDLLDAPRHPY 250

Query: 236 LKDMVEAYDRLSKPTDKTVVEVEDASKRYYVVN--GGETL--------NLKDISFKVKEK 285
            K ++ +     +P      +    S R  VV+  G ++L         L  +S  + E 
Sbjct: 251 TKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEG 310

Query: 286 EILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMNLRRKIGIMHQEFS 345
           E+++++G SG+GK+ + R +AGL    +G ++ +G + ++  WN   L  ++       S
Sbjct: 311 EVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE-RNEDWNDYRLNCQMVFQDPYSS 369

Query: 346 LAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDK 405
           L   +T+  L++  L                      ++V GL Q       + +  L+ 
Sbjct: 370 LDPRMTIQALVEEAL----------------------RLVPGLDQ-----AAKRKRALET 402

Query: 406 IGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEP 465
           +                        E + L  +   + P ELSGG++ RVA+A  +A  P
Sbjct: 403 L------------------------EEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRP 438

Query: 466 DILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKL 525
             L+ DEP   LD     +V +    +    G + + ISH + ++++++DR +++ +G++
Sbjct: 439 RFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRI 498

Query: 526 LMNGNPEEI 534
           +  G+ + I
Sbjct: 499 IEEGDRDTI 507



 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 19/253 (7%)

Query: 6   ENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGKT 65
           ++L K+   K AL  VS D+ +G+++ ++G SG+GKTTL + + G+    EG I   G+ 
Sbjct: 288 KSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE 347

Query: 66  ENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEE--YRKDATEIL 123
            N  E    +      ++ +P  Y+ +     ++   +E L L   +++   RK A E L
Sbjct: 348 RN--EDWNDYRLNCQMVFQDP--YSSLDPRMTIQALVEEALRLVPGLDQAAKRKRALETL 403

Query: 124 KLVGL-EHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQIL 182
           + VGL       Y + LSGG++QR+ + R +A+         L+ DEP +      +  +
Sbjct: 404 EEVGLGVDYAGRYPHELSGGQRQRVAIARAIAR-----RPRFLIADEPVSALDVTVRAQV 458

Query: 183 LDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMK-------DTPEKVVDEF 235
           LD+  ++ ++ G + +  SH   + + +    +++++G+II +       D+P +     
Sbjct: 459 LDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRR 518

Query: 236 LKDMVEAYDRLSK 248
           L   + A D+  K
Sbjct: 519 LLSAIPALDQNEK 531



 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 60/295 (20%)

Query: 250 TDKTVVEVEDASKRYYVVNGGETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLE 309
           TD T++ V   S     V G     +KD+SF +   EI  I+G SG+GK++  R L  L 
Sbjct: 2   TDNTLLTVRGLSLE---VAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58

Query: 310 AP----DKGVVKLEGIDLKDFGWNRMNLRR--KIGIMHQE--FSLAHYLTVNELLKYRLG 361
            P      G V  +G D+       +   R  +IG++ QE   SL   +T+   L+  L 
Sbjct: 59  PPAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLI 118

Query: 362 VKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKP 421
           + +  + E  + K  E+                        L ++GI +           
Sbjct: 119 LHTKLSPEERREKILEM------------------------LRRVGIRDP---------- 144

Query: 422 VEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLT 481
                          +  L   P E SGG + R+ +A  + L+P +L+ DEP   LD + 
Sbjct: 145 ---------------EGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVI 189

Query: 482 LREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGNPEEICE 536
            R+V   + ++    GT ++LISH + ++   + R +++++G ++  G  E++ +
Sbjct: 190 QRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDLLD 244