Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 2e-34
 Identities = 134/550 (24%), Positives = 256/550 (46%), Gaps = 90/550 (16%)

Query: 16  VALDNVSFDVKKGDILGIIGKSGAGKT----TLIKIL-RGVESFDEGKIEVCGK---TEN 67
           VA+D+VSFD+  G+++ ++G+SG+GK+    +++K+L     S   GKI   GK   T  
Sbjct: 27  VAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAASHPSGKILFDGKDMLTLP 86

Query: 68  LREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEM--EEYRKDATEILKL 125
            R + A+       ++ EP     +  L+ +     E L L + +   E R+   E+L  
Sbjct: 87  ERALRAVRGNDITMIFQEP--MTSLNPLHTIERQIGEILELHQAITGAEARQRTLELLLQ 144

Query: 126 VGL---EHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQIL 182
           VG+   E +  AY + LSGG++QR+++   LA     N   +L+ DEP T      +  +
Sbjct: 145 VGIREPEKRLKAYPHELSGGQRQRVMIAMALA-----NRPKLLIADEPTTALDVTVQAQI 199

Query: 183 LDVLKNINEKLGVTIIVTSH-LPEIHKYLCKSCILIENGKIIMKDTPEKVVDE----FLK 237
           L++L ++  + G++++  +H L  + K+  + C++ + GKI+   T E+V  +    + +
Sbjct: 200 LELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTK-GKIVETGTVEQVFTDPQHAYTR 258

Query: 238 DMVEAYDRLSKP---TDKTVVEVEDASKRYYVVNGGETLNLKD-------ISFKVKEKEI 287
            ++ A  +   P     K VV   D  K ++ +  G    + D       I   ++  + 
Sbjct: 259 HLLAAEPKGEPPHSDASKPVVMQGDDIKVWFPIKAGLMRRVIDHVKAVDGIDITLRAGQT 318

Query: 288 LSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMN-LRRKIGIMHQE--F 344
           + ++G SG+GK+ +   L+ L A  KG +   G  +  + +  M  LR ++ ++ Q+   
Sbjct: 319 VGVVGESGSGKTTLGLALSRLIA-SKGRISFIGQSIDSYSYEMMKPLRNRLQVVFQDPYG 377

Query: 345 SLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLD 404
           SL+  ++V E++             +  LK  E  +S           D  +T +   L+
Sbjct: 378 SLSPRMSVGEII-------------AEGLKVHERSLS----------ADERDTRVATALE 414

Query: 405 KIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALE 464
           ++G+         PA    Y                   P E SGG++ R+A+A  + L+
Sbjct: 415 EVGLD--------PATRWRY-------------------PHEFSGGQRQRIAIARAMVLK 447

Query: 465 PDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGK 524
           P  ++LDEP   LD     +V + L+ +        + ISH + ++K +++  I++  GK
Sbjct: 448 PRFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISHDLRVVKALANDLIVMRHGK 507

Query: 525 LLMNGNPEEI 534
           ++ +G   EI
Sbjct: 508 VVESGPAAEI 517



 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 59/298 (19%)

Query: 246 LSKPTDKTVVEVEDASKRYYVVNGGETLNLKDISFKVKEKEILSILGPSGTGKSV----I 301
           + +   + ++ V D S  ++   G  ++ +  +SF +   E+++++G SG+GKSV    I
Sbjct: 1   MKETNTQPLLSVRDLSVAFHQ-GGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSI 59

Query: 302 LRLLAGLEAP-DKGVVKLEGIDLKDFGWNRMNLRR--KIGIMHQE--FSLAHYLTVNELL 356
           L+LL    A    G +  +G D+       +   R   I ++ QE   SL    T+   +
Sbjct: 60  LKLLPYPAASHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQI 119

Query: 357 KYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKL 416
              L +    T   A+ +  EL                        L ++GI E      
Sbjct: 120 GEILELHQAITGAEARQRTLEL------------------------LLQVGIRE------ 149

Query: 417 FPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGD 476
                               ++ L   P ELSGG++ RV +A+ LA  P +L+ DEP   
Sbjct: 150 -------------------PEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPTTA 190

Query: 477 LDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGNPEEI 534
           LD     ++   L  +    G +++ I+H + ++++ +DR  ++ +GK++  G  E++
Sbjct: 191 LDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248