Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 478 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score =  115 bits (288), Expect = 3e-30
 Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 24/333 (7%)

Query: 102 FVALMLMGLASVSAVVMADDLFNIYVFYEIAAIAQTGLVIAS---GTEKAYRSAFRYLIL 158
           +  L++     +  +V A D+  +YV  E+ ++A    V+AS     EK+  +  +Y +L
Sbjct: 106 YAVLIVFAAIGMGMMVSAGDMLTLYVGLEMNSLAS--YVLASFMRQDEKSSEAGLKYFVL 163

Query: 159 GNFAGSILLLGVSMLLAATGTLNITDMHNFLLNNPATPTIYGGLLMLIIGLCYGSGLPPF 218
           G+ A  ILL G+S+L   TG+     +   + +  +   ++G L+ ++ GL +     PF
Sbjct: 164 GSLASGILLYGISLLYGFTGSTAFDGIAIAMGDGVSKGELFG-LVFVLAGLAFKISAVPF 222

Query: 219 HTVKADIYARAKPHVAAMLQTYSKFVLVALLL-VIFKLFG--GLSYFASAHGVLIGLSVL 275
           H    D+Y  A   V A   +  K   + L++ V  +  G  GL +      ++I +++ 
Sbjct: 223 HMWTPDVYEGAPTPVTAFFGSAPKVAAMGLMVRVAIEALGPAGLDW----QQIIIFVALA 278

Query: 276 GMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALF 335
            ++FG V A+ QT  K+L+AY +I+  G+   G+A GTP G+ A + +   +V+     F
Sbjct: 279 SILFGAVAAIGQTSIKRLMAYSSINNVGFALVGLAAGTPAGVAATMSYMAIYVVMTIGAF 338

Query: 336 ---LGAHIVERRKEGNLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAA 392
              L     + +    +  L GL       +        +++G+PP  GF +K L+ +AA
Sbjct: 339 ACILQMRDADGKPVDTIASLAGLSQSRKGLSAAFAIFMFSMAGIPPLFGFWAKFLVFDAA 398

Query: 393 MNVNMPELAIIMILVSIGTFVSMMKAFYLIYLK 425
           +  N+  LA      + G  +S++ AFY  YLK
Sbjct: 399 VAANLTALA------AFGIAMSVIGAFY--YLK 423