Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 487 a.a., NADH-quinone oxidoreductase subunit N from Magnetospirillum magneticum AMB-1

 Score =  120 bits (300), Expect = 1e-31
 Identities = 114/496 (22%), Positives = 220/496 (44%), Gaps = 37/496 (7%)

Query: 1   MNLLPLIVVFPMFVA----IIFNYLNGKDKLIRPMTLIMAILLLALPFIGSYGIYNFGAH 56
           ++L+P++    M VA    ++      +D       L++  L  A+  + S G     A 
Sbjct: 5   LDLVPVLPEIFMAVAGLALLMLGVFRKEDSTKSVSVLVILALGAAMVLVSSLGGERLTAF 64

Query: 57  GIENGLISGISYLYTPVKQLIITVIMLIGSLVLITGLGEKKSSGL-FVALMLMGLASVSA 115
              NGL   ++  +    + ++ V   I + + +  L  +K     +  L+L     +  
Sbjct: 65  ---NGLF--VADRFAGFAKGLVLVASAIATAMSLPYLEREKIGRFEYPVLVLFATLGMMM 119

Query: 116 VVMADDLFNIYVFYEIAAIAQTGLVIAS-GTEKAYRSAFRYLILGNFAGSILLLGVSMLL 174
           ++ A+D   +Y+  E+ ++A   L   +    +A  +  +Y +LG+ A  +LL G+S+L 
Sbjct: 120 MISANDFIALYLGLELQSLALYVLAAYNRDNARATEAGLKYFVLGSLASGLLLYGISLLY 179

Query: 175 AATGTLNITDMHNFLL---NNPATPT--IYGGLLMLIIGLCYGSGLPPFHTVKADIYARA 229
              GT +   + N      ++P  P   I  GL+ ++ GL +     PFH    D+Y  A
Sbjct: 180 GFAGTTSFEGLANLFAGGHDHPIKPNMGIIAGLVFVLAGLSFKVSAVPFHMWAPDVYEGA 239

Query: 230 KPHVAAMLQTYSKFVLVALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVF-GVVMALLQT 288
              V +      K  + AL L++  + G  +        ++    +G +F G   A++QT
Sbjct: 240 PTPVTSFFAVAPK--IAALCLLVRVMTGPFADLVEQWRQVVTFIAIGSMFVGSFAAVVQT 297

Query: 289 DYKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALFLGAHIVERRKEG- 347
           + K+L+AY +I   G+V  GIA G+ LGI   + +   ++      F  A I+  R++G 
Sbjct: 298 NIKRLMAYSSIGHVGFVLVGIAAGSTLGIQGVLIYLAIYLFMNVGAF--AVILSMRQKGR 355

Query: 348 ---NLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIM 404
               ++ L GL    P  AF++     +++GVPP  GF  K  +  AA+   +  L+I+ 
Sbjct: 356 MVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIESGLYTLSILG 415

Query: 405 ILVSIGTFVSMMKAFYLIYLKPCSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGIFP-- 462
           +L S+ +    ++   ++Y      E +E + K   +   +  +AV T + +   + P  
Sbjct: 416 VLSSVVSTYYYLRIVKVMYF----DEPVEAFDKPVGTSMTLV-MAVSTIVILAFTLIPAP 470

Query: 463 -----NLATDIIYPFA 473
                  A  +++P A
Sbjct: 471 LVTSAKAAAQVLFPAA 486