Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 669 a.a., hydrogenase 4 subunit B from Magnetospirillum magneticum AMB-1

 Score =  145 bits (365), Expect = 5e-39
 Identities = 118/425 (27%), Positives = 200/425 (47%), Gaps = 42/425 (9%)

Query: 76  LIITVIMLIGSLVLITGLG------EKKSSGLFVALMLMGLASVSAVVMADDLFNIYVFY 129
           L + V+ L  +     G+G      E +    F  L L G+   +AV++ADD F   V +
Sbjct: 80  LFMVVVNLATAAASAYGIGYCSHLPEPRRVTPFYPLFLFGM---NAVLIADDAFMFLVAW 136

Query: 130 EIAAIAQTGLVIASGTEKAYR-SAFRYLILGNFAGSILLLGVSMLLAATGTLNITDMHNF 188
           E  +++   LV+A       R +AF YL++  F    LL    ++    G  +   M   
Sbjct: 137 EFMSLSSWLLVLADHKNAENRQAAFVYLVMACFGTFCLLTCFGLMAGGQGAYSFPAMRAA 196

Query: 189 LLNNPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAMLQ-TYSKFVLVA 247
            L+  A   +   +L+ ++G    +GL P H      +  A  HV+A++    +K  L  
Sbjct: 197 KLDGVAGFLV---VLLALLGAGSKAGLVPLHAWLPLAHPAAPSHVSALMSGVMTKVALYG 253

Query: 248 LLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAA 307
           L+ ++F L G +S+   A  V++ +  +  V GV+ A+LQ D KKLLAY  +   G V  
Sbjct: 254 LIRILFDLHGEVSWAWGA--VMMAIGGITAVMGVLYAILQDDLKKLLAYSTVENIGVVVI 311

Query: 308 GIALG-----------TPLGIVAGIFHAINHVIYKSALFLGAH-IVERRKEGNLNKLGGL 355
           G+ L              L +VAG++H +NH I+K+  FL A  ++    E +L KLGGL
Sbjct: 312 GLGLAIAFKGSGEKTLAALALVAGLYHIVNHSIFKTLWFLSAGAVITATGERDLGKLGGL 371

Query: 356 LPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEA----------AMNVNMPELAIIMI 405
              +P      L   +AIS +PP NGF S+ L+ ++          AM   +P +  ++ 
Sbjct: 372 TKRMPWNGVAALVGAIAISALPPLNGFVSEWLIFQSLFKGPSLPHWAMKFGVPVVGAMLA 431

Query: 406 LVSIGTFVSMMKAFYLIYL-KPCSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGIFPNL 464
           L +       ++A+ + +L +P S+   + ++     ++ V   A+L  LC++LG  P  
Sbjct: 432 LAAALAAACFVRAYGIAFLGRPRSEAAAQAHQVPASMRWTV---ALLAALCVVLGAIPVT 488

Query: 465 ATDII 469
            TD +
Sbjct: 489 VTDAL 493