Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 479 a.a., hydrogenase 4 membrane subunit (NCBI) from Escherichia coli BW25113

 Score =  110 bits (275), Expect = 1e-28
 Identities = 102/357 (28%), Positives = 167/357 (46%), Gaps = 22/357 (6%)

Query: 73  VKQLIITVIMLIGSLVLITGLG---------EKKSSGLFVALMLMGLASVSAVVMADDLF 123
           V  LI+ V++ +G LV I   G             +  + A +L+ + +++ +V++  L 
Sbjct: 77  VSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLL 136

Query: 124 NIYVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAATGTLNIT 183
              +F+EI       L+    ++KA RSA + L++ +     L L  + L   TGT  ++
Sbjct: 137 GQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALS 196

Query: 184 DMHNFLLNNPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAMLQTYSKF 243
            M    L+  A   +YGG+L    G    S   P      D      P ++A L   S  
Sbjct: 197 AMSE--LHGDARYLVYGGILFAAWG---KSAQLPMQAWLPDAMEAPTP-ISAYLHAAS-M 249

Query: 244 VLVALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLLAYHAISQGG 303
           V V + +    +  G +      GV + ++++ +++G +M L Q D K+LLA+  I+Q G
Sbjct: 250 VKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLG 309

Query: 304 YVAAGIAL---GTPLGIVAGIFHAINHVIYKSALFLGAHIVERRKEGN-LNKLGGLLPVI 359
           ++  G++L   G+ L +   I + +NH   KS  FL A  +        L +L G+L  +
Sbjct: 310 WMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTL 369

Query: 360 PATAFMVLCAKLAISGVPPFNGFQSK--LLLAEAAMNVNMPELAIIMILVSIGTFVS 414
           P        A LAI+GVPPFNGF SK  L  A  A++V    L   MIL+ I +  S
Sbjct: 370 PLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVAS 426