Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 672 a.a., hydrogenase 4 subunit B from Escherichia coli ECRC101

 Score =  120 bits (301), Expect = 1e-31
 Identities = 104/413 (25%), Positives = 197/413 (47%), Gaps = 36/413 (8%)

Query: 76  LIITVIMLIGSLVLITGLGEKKSSGLFVALMLMGL--ASVSAVVMADDLFNIYVFYEIAA 133
           L+I++++++ SL  +T + E +  G       M +  AS+ A+++ D+ F   V +E+ +
Sbjct: 86  LVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMS 145

Query: 134 IAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAA-TGTLNITDMHNFLLNN 192
           ++   LVIA   + +  +   Y  + + AGS+L++   +L+   +G+L+        L+ 
Sbjct: 146 LSSWFLVIARQDKTSINAGMLYFFIAH-AGSVLIMIAFLLMGRESGSLDFASFRTLSLSP 204

Query: 193 PATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAMLQ-TYSKFVLVALLLV 251
                ++   L+   G    +G+ P H+     +  A  H +A++     K  +  +L V
Sbjct: 205 GLASAVF---LLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKV 261

Query: 252 IFKLFG--GLSYFASAHGVLI-GLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYV--A 306
              L    GL  +    G+L+  +  +  + GV+ AL + D K+LLA+  +   G +  A
Sbjct: 262 AMDLLAQTGLPLW---WGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLA 318

Query: 307 AGIA---------LGTPLGIVAGIFHAINHVIYKSALFLGAH-IVERRKEGNLNKLGGLL 356
            G+A         L T +G++  +FH +NH ++K  LFLGA  I+ R    ++ K+G L 
Sbjct: 319 VGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALA 378

Query: 357 PVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPE---------LAIIMILV 407
             +P TA   L   LAIS +PP NGF S+    ++  +++  E         +A++M+ V
Sbjct: 379 KRMPWTAAACLIGCLAISALPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAV 438

Query: 408 SIGTFVSMMKAFYLIYLKPCSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGI 460
           + G  V      Y I      +    E  +  P+   V ++ +L  LC+L+ +
Sbjct: 439 TGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIV-AMLLLAALCVLIAL 490