Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 482 a.a., NADH-quinone oxidoreductase subunit N from Azospirillum sp. SherDot2

 Score =  126 bits (316), Expect = 2e-33
 Identities = 109/421 (25%), Positives = 194/421 (46%), Gaps = 30/421 (7%)

Query: 4   LPLIVVFPMFVAIIFNYLNGKDKLIRPMTL--IMAILLLALPFIGSYGIYNFGAHGIENG 61
           LP I +    VA++   +   D   RP++   I+ +LL A+  +G    Y  G     NG
Sbjct: 12  LPEIFLALSGVALLMLGVFRGDGFTRPVSYLSIVCMLLAAILAMG----YGSGRVVTFNG 67

Query: 62  LISGISYLYTPVKQLIITVIMLIGSLVLITGLG----EKKSSGLFVALMLMGLASVSAVV 117
           +     ++       +  ++++  +  +I GLG    E+ +   F  LM+     +  ++
Sbjct: 68  M-----FVMDAFGVFMKVLVLVSAAFAVILGLGFNEREQMARFEFPVLMIFATLGMLMMI 122

Query: 118 MADDLFNIYVFYEIAAIAQTGLVIAS---GTEKAYRSAFRYLILGNFAGSILLLGVSMLL 174
            A+D  ++YV  E  ++A    VIA+    + K+  +  +Y +LG+ +  +LL G S++ 
Sbjct: 123 SANDFISLYVGLETQSLAL--YVIAAFRRDSAKSSEAGLKYFVLGSLSSGMLLYGASLVY 180

Query: 175 AATGTLNITDMHNFLLNNP-ATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHV 233
              GT +   +          +P +  GL+ ++ GL +     PFH    D+Y  A   V
Sbjct: 181 GFAGTTSFDKVAALFAGGAHVSPGLVIGLVFVMAGLAFKVSAAPFHMWTPDVYEGAPTPV 240

Query: 234 AAMLQTYSKFVLVALLL-VIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKK 292
            A      K   +ALL  V+ + FG L+  A  H VL+  ++L MV G  +A++QT+ K+
Sbjct: 241 TAFFAAAPKVAAIALLTRVVMEPFGHLA--AQWHQVLVATAILSMVIGSFVAIMQTNIKR 298

Query: 293 LLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALFLGAHIVERRKEG----N 348
           L+AY +I   GY   G+  GT  G+   + +   ++      F  A I+  + +G     
Sbjct: 299 LMAYSSIGHVGYALVGLTTGTQDGVRGVLIYMALYIAMNIGAF--AVILSMKAKGQMLEE 356

Query: 349 LNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVS 408
           +    GL    P  A  +     +++G+PP  GF  KL +  AA+      LA+I +L S
Sbjct: 357 IKDFSGLSKTNPMLAATMAIFMFSMAGIPPMAGFFGKLYVFLAAVAAQEYTLAVIGVLTS 416

Query: 409 I 409
           +
Sbjct: 417 V 417