Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 480 a.a., NADH ubiquinone oxidoreductase chain N from Agrobacterium fabrum C58

 Score =  128 bits (322), Expect = 4e-34
 Identities = 101/390 (25%), Positives = 190/390 (48%), Gaps = 23/390 (5%)

Query: 80  VIMLIGSL---VLITGLGEKKSSGLFVALMLMGLASVSAVVM--ADDLFNIYVFYEIAAI 134
           V+ LIGS+   +L  G G  +  G F   +L+ LA++  ++M  A+++ ++Y+  E+ ++
Sbjct: 81  VLALIGSITAMILAVGQGRFEPIGRFEYPVLLVLATLGILLMISANNMISLYMALELQSL 140

Query: 135 AQTGLVIASGTEKAYRSA---FRYLILGNFAGSILLLGVSMLLAATGTLNITDMHNFLLN 191
           A    V+ +   ++ RS     +Y +LG  +  +LL G+S++   TG    T++   L +
Sbjct: 141 AL--YVVCAINRESLRSTEAGLKYFVLGALSSGMLLYGMSLVYGFTGNTGFTEIAQVLAS 198

Query: 192 NPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAMLQTYSKFVLVALLL- 250
              +  +  GL+ ++ GL +     PFH    D+Y  A   V A L    K   +A+L+ 
Sbjct: 199 ETRSLGLVFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPVTAFLSAAPKIGAMAILVR 258

Query: 251 VIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIA 310
           ++ + F  +  FA    +++ +S+  M+ G   A+ Q + K+L+AY +I   GY   G+A
Sbjct: 259 IVVEAFQPV--FADWQQIVVFISIASMLLGSFAAIGQKNIKRLMAYSSIGHMGYALVGLA 316

Query: 311 LGTPLGIVAGIFHAINHVIYKSALFLGAHIVERRKEGNLNK---LGGLLPVIPATAFMVL 367
            GT  GI   I +   +++     F     + R++ GN+     L GL    P  A ++ 
Sbjct: 317 AGTEAGISGVILYMTIYMVMTLGTFACILSMRRKEIGNVENVEDLAGLSSTNPFMAVVLT 376

Query: 368 CAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVSI---GTFVSMMKAFYLIYL 424
               +++G+PP  GF  K  +  AA+   +  LAII ++ S+     ++ ++K  +    
Sbjct: 377 ILMFSLAGIPPLAGFFGKYYVFLAAIEAKLYPLAIIGVIGSVVGAYYYIRVVKVMWFDEA 436

Query: 425 KPCSQEQLEEYKKAKPSKYAVFSLAVLTFL 454
           K   +    E K      YA+ +L V+ F+
Sbjct: 437 KDKFERPAGELKVV----YALSALFVVAFV 462