Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 254 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1
Score = 62.4 bits (150), Expect = 2e-14
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 51/214 (23%)
Query: 190 LCPKDTIIEAEMVDGCTRCNICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVLEISEF 249
L P I EA+ + C +C C +VCPV AIE G + E F
Sbjct: 53 LRPPGAIDEADFLAACIKCGQCVQVCPVKAIELGDLDEG--------------------F 92
Query: 250 KVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENGK---ILYDPKTCTLCNTCVKECP 306
V +A+ + CV CP+ AL + K + N C+
Sbjct: 93 GVGVPYVPARAQACDFSCDAVQCVLACPTGALSHKISKKEEVRMGLARLDRPNACLARKG 152
Query: 307 QGVR----------INKGEFVDG-----------GCVLCELCIKECP-EDAISIKERS-- 342
+G + +++ +D +C+LC++ECP + AI+++ S
Sbjct: 153 EGFKGVARPAPFKGVHRYPEIDRWKPVKLAEYKYDLAVCDLCVRECPVQGAITLEPMSAD 212
Query: 343 ----KFTSIDKEECIACGTCSMVCPNDAITVVID 372
+ T + + C+ CG C M+CP + ++V+D
Sbjct: 213 PADKRRTPVVHQPCVGCGMCEMICPTEPASIVVD 246
Score = 37.7 bits (86), Expect = 4e-07
Identities = 42/198 (21%), Positives = 66/198 (33%), Gaps = 46/198 (23%)
Query: 266 CINCGLCVDKCPSNALRF---ENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCV 322
CI CG CV CP A+ + G + P C C
Sbjct: 68 CIKCGQCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDFSCD---------------- 111
Query: 323 LCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPN-------DAITVVIDSLN 375
C+ CP A+S K I K+E + G + PN + V
Sbjct: 112 -AVQCVLACPTGALSHK-------ISKKEEVRMGLARLDRPNACLARKGEGFKGVARPAP 163
Query: 376 FSGNKVHSKVI---------FNDNCVICEKCAIHCP-RDVIENTSGHKKVVDRENSYIRT 425
F G + ++ + + +C+ C CP + I D+ + +
Sbjct: 164 FKGVHRYPEIDRWKPVKLAEYKYDLAVCDLCVRECPVQGAITLEPMSADPADKRRTPVV- 222
Query: 426 DNDYCVKCGLCTIICPND 443
+ CV CG+C +ICP +
Sbjct: 223 -HQPCVGCGMCEMICPTE 239
Score = 37.4 bits (85), Expect = 6e-07
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 21 KEISKCMEVCPTNAIKMIDGKAFSCITCGTCAKECPT-GAIKKNEYGGYYVNRKL----- 74
K + + E+ +K+ + K + C C +ECP GAI +++
Sbjct: 165 KGVHRYPEIDRWKPVKLAEYK-YDLAVCDLCVRECPVQGAITLEPMSADPADKRRTPVVH 223
Query: 75 --CTGCGICKNVCPID----IIDIR 93
C GCG+C+ +CP + ++DIR
Sbjct: 224 QPCVGCGMCEMICPTEPASIVVDIR 248
Score = 36.6 bits (83), Expect = 1e-06
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 16/57 (28%)
Query: 430 CVKCGLCTIICPNDAIDKGEIN-------------TEKCEY-CSA--CVNICPTRAI 470
C+KCG C +CP AI+ G+++ + C++ C A CV CPT A+
Sbjct: 68 CIKCGQCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDFSCDAVQCVLACPTGAL 124
Score = 36.2 bits (82), Expect = 1e-06
Identities = 45/214 (21%), Positives = 68/214 (31%), Gaps = 48/214 (22%)
Query: 56 PTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIRE----DSTGKSYPTGMCVMCGL 111
P GAI + ++ C CG C VCP+ I++ + G Y C
Sbjct: 55 PPGAIDEADF------LAACIKCGQCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDF 108
Query: 112 ------CTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYE------------ 153
C CP A + + ++R + G+ ++
Sbjct: 109 SCDAVQCVLACPTGALSHKISKKEEVRMGLARLDRPNACLARKGEGFKGVARPAPFKGVH 168
Query: 154 -FPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICN 212
+PE K VK AE K ++ C C+ CP I E +
Sbjct: 169 RYPEIDRWKPVKLAEYKYDLAV---------CDLCVRECPVQGAITLEPMSAD------- 212
Query: 213 EVCPVDAIEYGQVTENCILCGNCISKCPKDVLEI 246
P D V + C+ CG C CP + I
Sbjct: 213 ---PADKRRTPVVHQPCVGCGMCEMICPTEPASI 243
Score = 30.0 bits (66), Expect = 9e-05
Identities = 42/186 (22%), Positives = 57/186 (30%), Gaps = 59/186 (31%)
Query: 352 CIACGTCSMVCPNDAITV--VIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCPRDVIENT 409
CI CG C VCP AI + + + V ++ D +C + CP + +
Sbjct: 68 CIKCGQCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDFSCDAVQCVLACPTGALSHK 127
Query: 410 SGHKKVV-------DRENS-----------------------YIRTDNDYCVK------- 432
K+ V DR N+ Y D VK
Sbjct: 128 ISKKEEVRMGLARLDRPNACLARKGEGFKGVARPAPFKGVHRYPEIDRWKPVKLAEYKYD 187
Query: 433 ---CGLCTIICP-----------NDAIDKGE--INTEKCEYCSACVNICPTR----AIRI 472
C LC CP D DK + + C C C ICPT + I
Sbjct: 188 LAVCDLCVRECPVQGAITLEPMSADPADKRRTPVVHQPCVGCGMCEMICPTEPASIVVDI 247
Query: 473 YRTWNE 478
R W +
Sbjct: 248 RRKWGD 253
Score = 30.0 bits (66), Expect = 9e-05
Identities = 43/205 (20%), Positives = 65/205 (31%), Gaps = 73/205 (35%)
Query: 25 KCMEVCPTNAIKM-------------IDGKAFSC-ITCGT--CAKECPTGAI-----KKN 63
+C++VCP AI++ + +A +C +C C CPTGA+ KK
Sbjct: 73 QCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDFSCDAVQCVLACPTGALSHKISKKE 132
Query: 64 EYGGYYVNRKLCTGC---------GIC-----KNVCPIDIIDIREDSTGKSYPTGMCVMC 109
E C G+ K V ID + Y + V C
Sbjct: 133 EVRMGLARLDRPNACLARKGEGFKGVARPAPFKGVHRYPEIDRWKPVKLAEYKYDLAV-C 191
Query: 110 GLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERK 169
LC ECP + +P S PA+++
Sbjct: 192 DLCVRECPVQGAITLEPMS----------------------------------ADPADKR 217
Query: 170 LRHSISIDSKKCVECGKCIYLCPKD 194
+ + CV CG C +CP +
Sbjct: 218 ---RTPVVHQPCVGCGMCEMICPTE 239
Score = 28.5 bits (62), Expect = 3e-04
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 441 PNDAIDKGEINTEKCEYCSACVNICPTRAIRI 472
P AID+ + C C CV +CP +AI +
Sbjct: 55 PPGAIDEADF-LAACIKCGQCVQVCPVKAIEL 85