Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 287 a.a., Putative glycyl-radical enzyme activating enzyme YjjW from Escherichia coli ECRC62
Score = 53.5 bits (127), Expect = 9e-12
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 266 CINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQ 307
C +CG CV +CP AL+ +GK++++ C C+TC+K CPQ
Sbjct: 47 CNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQ 88
Score = 40.8 bits (94), Expect = 6e-08
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 11 TYEECEDCKNKEISKCMEVCPTNAIKMIDGK----AFSCITCGTCAKECPTGA 59
T C DC +C+ CP A++++DGK A C C TC K CP A
Sbjct: 43 TMGRCNDC-----GECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHA 90
Score = 38.1 bits (87), Expect = 4e-07
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 272 CVDKCPSNALRFENG-----KILYDPKT---CTLCNTCVKECP-QGVRINKGEFVDGG-- 320
CVD S F G K ++P T C C CV +CP Q ++I G+ V
Sbjct: 16 CVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVVWNAVV 75
Query: 321 CVLCELCIKECPEDA 335
C C+ C+K CP+ A
Sbjct: 76 CEQCDTCLKRCPQHA 90
Score = 36.2 bits (82), Expect = 1e-06
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 18/83 (21%)
Query: 199 AEMVDGCT-RCNICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVLEISEFKVVKTKED 257
A + GC RC C+ + C CG C+ +CP L+I + KVV
Sbjct: 25 ALFLQGCNLRCKNCHNPWTMG---------RCNDCGECVPQCPHQALQIVDGKVVWN--- 72
Query: 258 VKAKPEKHCINCGLCVDKCPSNA 280
C C C+ +CP +A
Sbjct: 73 -----AVVCEQCDTCLKRCPQHA 90
Score = 34.3 bits (77), Expect = 6e-06
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 180 KCVECGKCIYLCPKDTIIEAEMVDG--------CTRCNICNEVCPVDAIEYGQ 224
+C +CG+C+ CP + ++VDG C +C+ C + CP A Q
Sbjct: 46 RCNDCGECVPQCPHQAL---QIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQ 95
Score = 33.9 bits (76), Expect = 7e-06
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 430 CVKCGLCTIICPNDAID--KGEI--NTEKCEYCSACVNICPTRA 469
C CG C CP+ A+ G++ N CE C C+ CP A
Sbjct: 47 CNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHA 90
Score = 32.0 bits (71), Expect = 3e-05
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 45 CITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDST------- 97
C CG C +CP A++ + G N +C C C CP + + +
Sbjct: 47 CNDCGECVPQCPHQALQIVD-GKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSVDEVLSH 105
Query: 98 ---GKSYPTGMCVMCGLCTTECPYNARLYFDPSSLKN 131
+ G+ V G TT+ P+ L+ +++KN
Sbjct: 106 VRKAVLFIEGITVSGGEATTQLPFVVALF---TAIKN 139
Score = 30.4 bits (67), Expect = 8e-05
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 9/69 (13%)
Query: 298 CNTCVKECPQGVRINKGEFVDGGCVLCELCIKECPEDAISIKERSKFTSIDKEECIACGT 357
CN K C + G C C C+ +CP A+ I + + C C T
Sbjct: 31 CNLRCKNC-------HNPWTMGRCNDCGECVPQCPHQALQIVDGK--VVWNAVVCEQCDT 81
Query: 358 CSMVCPNDA 366
C CP A
Sbjct: 82 CLKRCPQHA 90
Score = 30.4 bits (67), Expect = 8e-05
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 10/52 (19%)
Query: 352 CIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCPR 403
C CG C CP+ A+ +V G V + V+ C C+ C CP+
Sbjct: 47 CNDCGECVPQCPHQALQIV------DGKVVWNAVV----CEQCDTCLKRCPQ 88
Score = 30.0 bits (66), Expect = 1e-04
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 207 RCNICNEV---CPVDAIEY--GQVTENCILC---GNCISKCPKDVLEISE 248
RCN C E CP A++ G+V N ++C C+ +CP+ +++
Sbjct: 46 RCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQ 95
Score = 25.8 bits (55), Expect = 0.002
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 17/83 (20%)
Query: 78 CGICKNVCPIDIID--------------IREDSTGKSYPTGMCVMCGLCTTECPYNARLY 123
C + + P +D +R + + G C CG C +CP+ A
Sbjct: 5 CALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQI 64
Query: 124 FDPSSLKNTKNKMLMERYSTIFK 146
D K N ++ E+ T K
Sbjct: 65 VDG---KVVWNAVVCEQCDTCLK 84
Score = 23.9 bits (50), Expect = 0.008
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 454 KCEYCSACVNICPTRAIRI 472
+C C CV CP +A++I
Sbjct: 46 RCNDCGECVPQCPHQALQI 64