Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 684 a.a., Ion-translocating oxidoreductase complex subunit B from Azospirillum sp. SherDot2
Score = 57.0 bits (136), Expect = 2e-12
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 286 GKILYDPKTCTLCNTCVKECPQGVRINKGE-----FVDGGCVLCELCIKECPEDAISI-- 338
G++ D + CTLC +CV CP G ++ + F CV C LC CPE IS+
Sbjct: 513 GRVSVDVEGCTLCLSCVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCPEKVISLVP 572
Query: 339 ----KERSKFTSIDKEE----CIACG 356
++R++ ++ KEE C++CG
Sbjct: 573 EIDFRDRARGAAVVKEEEPFCCVSCG 598
Score = 46.6 bits (109), Expect = 3e-09
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 320 GCVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGN 379
GC LC C+ CP A+ S ++ C+ CG C CP I++V ++F
Sbjct: 521 GCTLCLSCVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCPEKVISLV-PEIDFRDR 579
Query: 380 KVHSKVIFNDNCVICEKC 397
+ V+ + C C
Sbjct: 580 ARGAAVVKEEEPFCCVSC 597
Score = 43.1 bits (100), Expect = 3e-08
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 245 EISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKE 304
E + + V K D+ A C C+D CP+ A+ + DP C C +C
Sbjct: 263 EFEKPRFVDFKADLCAHSRSRKTGCTRCLDVCPTGAITPNGDHVAIDPHVCAGCGSCAAV 322
Query: 305 CPQG 308
CP G
Sbjct: 323 CPTG 326
Score = 42.0 bits (97), Expect = 7e-08
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 45 CITCGTCAKECPTGAIKKN-EYGGYYVNRKLCTGCGICKNVCP------IDIIDIREDST 97
C C +C CPTGA+ N + + C CG+CK CP + ID R+ +
Sbjct: 522 CTLCLSCVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCPEKVISLVPEIDFRDRAR 581
Query: 98 G----KSYPTGMCVMCG 110
G K CV CG
Sbjct: 582 GAAVVKEEEPFCCVSCG 598
Score = 40.4 bits (93), Expect = 2e-07
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 65 YGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECP 117
+G V+ + CT C C CP + D S+ CV CGLC T CP
Sbjct: 512 FGRVSVDVEGCTLCLSCVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCP 564
Score = 39.3 bits (90), Expect = 4e-07
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 324 CELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVI 371
C C+ CP AI+ +ID C CG+C+ VCP A T +
Sbjct: 287 CTRCLDVCPTGAIT--PNGDHVAIDPHVCAGCGSCAAVCPTGAATYAL 332
Score = 38.1 bits (87), Expect = 1e-06
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 48 CGTCAKECPTGAIKKNEYGGYY-VNRKLCTGCGICKNVCP 86
C C CPTGAI N G + ++ +C GCG C VCP
Sbjct: 287 CTRCLDVCPTGAITPN--GDHVAIDPHVCAGCGSCAAVCP 324
Score = 38.1 bits (87), Expect = 1e-06
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 8/42 (19%)
Query: 24 SKCMEVCPTNAIK------MIDGKAFSCITCGTCAKECPTGA 59
++C++VCPT AI ID C CG+CA CPTGA
Sbjct: 288 TRCLDVCPTGAITPNGDHVAIDPHV--CAGCGSCAAVCPTGA 327
Score = 38.1 bits (87), Expect = 1e-06
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 182 VECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVD-AIEYGQVT---ENCILCGNCIS 237
VE G + + PK T+ + EV P+ +G+V+ E C LC +C+
Sbjct: 471 VEAGMFLPMGPKRTVTMLALRHLHKAAPAPVEVLPLPPGAPFGRVSVDVEGCTLCLSCVG 530
Query: 238 KCPKD-VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL 281
CP +L+ ++ ++ +D C+ CGLC CP +
Sbjct: 531 ACPTGALLDNADKPMLSFAQDA-------CVQCGLCKTTCPEKVI 568
Score = 37.7 bits (86), Expect = 1e-06
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 202 VDGCTRCNICNEVCPVDAI---------EYGQVTENCILCGNCISKCPKDVL----EISE 248
V+GCT C C CP A+ + Q + C+ CG C + CP+ V+ EI
Sbjct: 519 VEGCTLCLSCVGACPTGALLDNADKPMLSFAQ--DACVQCGLCKTTCPEKVISLVPEIDF 576
Query: 249 FKVVKTKEDVKAKPEKHCINCG 270
+ VK + C++CG
Sbjct: 577 RDRARGAAVVKEEEPFCCVSCG 598
Score = 35.8 bits (81), Expect = 5e-06
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 174 ISIDSKKCVECGKCIYLCPKDTIIE-------AEMVDGCTRCNICNEVCPVDAI 220
+S+D + C C C+ CP +++ + D C +C +C CP I
Sbjct: 515 VSVDVEGCTLCLSCVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCPEKVI 568
Score = 35.0 bits (79), Expect = 8e-06
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 71 NRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLY-FDPSSL 129
+R TGC C +VCP I D + +C CG C CP A Y P++
Sbjct: 280 SRSRKTGCTRCLDVCPTGAITPNGDHV--AIDPHVCAGCGSCAAVCPTGAATYALPPAAT 337
Query: 130 KNTKNKMLMERY 141
+ + L+ Y
Sbjct: 338 VYERLRTLLSTY 349
Score = 34.3 bits (77), Expect = 1e-05
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 389 DNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI 445
+ C +C C CP + + + + + D CV+CGLC CP I
Sbjct: 520 EGCTLCLSCVGACPTGALLDNA--------DKPMLSFAQDACVQCGLCKTTCPEKVI 568
Score = 33.5 bits (75), Expect = 2e-05
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 346 SIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCPRDV 405
S+D E C C +C CP A+ D S D CV C C CP V
Sbjct: 516 SVDVEGCTLCLSCVGACPTGALLDNADKPMLS--------FAQDACVQCGLCKTTCPEKV 567
Query: 406 I 406
I
Sbjct: 568 I 568
Score = 30.0 bits (66), Expect = 3e-04
Identities = 14/51 (27%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 394 CEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDA 444
C +C CP I H + D C CG C +CP A
Sbjct: 287 CTRCLDVCPTGAITPNGDH----------VAIDPHVCAGCGSCAAVCPTGA 327
Score = 29.6 bits (65), Expect = 3e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Query: 26 CMEVCPTNAI------KMIDGKAFSCITCGTCAKECPTGAI 60
C+ CPT A+ M+ +C+ CG C CP I
Sbjct: 528 CVGACPTGALLDNADKPMLSFAQDACVQCGLCKTTCPEKVI 568
Score = 29.3 bits (64), Expect = 4e-04
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
Query: 204 GCTRCNICNEVCPVDAI----EYGQVTEN-CILCGNCISKCP 240
GCTRC +VCP AI ++ + + C CG+C + CP
Sbjct: 286 GCTRC---LDVCPTGAITPNGDHVAIDPHVCAGCGSCAAVCP 324
Score = 28.1 bits (61), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 441 PNDAIDKGEINTEKCEYCSACVNICPTRAI 470
P + ++ E C C +CV CPT A+
Sbjct: 508 PGAPFGRVSVDVEGCTLCLSCVGACPTGAL 537
Score = 25.8 bits (55), Expect = 0.005
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 8/52 (15%)
Query: 232 CGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRF 283
C C+ CP + + V P C CG C CP+ A +
Sbjct: 287 CTRCLDVCPTGA-------ITPNGDHVAIDPHV-CAGCGSCAAVCPTGAATY 330
Score = 25.8 bits (55), Expect = 0.005
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 174 ISIDSKKCVECGKCIYLCP 192
++ID C CG C +CP
Sbjct: 306 VAIDPHVCAGCGSCAAVCP 324
Score = 25.4 bits (54), Expect = 0.006
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 174 ISIDSKKCVECGKCIYLCPKDTIIEAEMVD 203
+S CV+CG C CP+ I +D
Sbjct: 546 LSFAQDACVQCGLCKTTCPEKVISLVPEID 575