Pairwise Alignments

Query, 170 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 52  CIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDYDKCIYCLYCHDFCP 105
           C+ CG C   CP +AIE+IP +   +  + +  A  KID D C+YC  C   CP
Sbjct: 154 CVLCGICAEYCPADAIELIPNDMNAL--SLNPIADIKIDLDACVYCKVCEKACP 205



 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 52  CIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKIDY-DKCIYCLYCHDFCPVFAL 109
           C+GCG C   CPT+AIEM P+  +   +  +    PK+D  +KC+ C  C   CP  A+
Sbjct: 32  CVGCGICSEICPTSAIEMGPLGAIFKGDIDA----PKLDISEKCVLCGMCACACPFDAV 86



 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 37  ILKG-IELPSSVFSEICIGCGGCKNACPTNAIEM-IPVEPVKITETYSK-EAIPKIDYDK 93
           I KG I+ P    SE C+ CG C  ACP +A+++ I  +P+     Y K +   +++  K
Sbjct: 55  IFKGDIDAPKLDISEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSK 114

Query: 94  CIYCLYCHDFCPVFAL 109
           C+ C  C   CP  A+
Sbjct: 115 CVLCEQCELVCPQCAI 130



 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 30  SKEMTAEILKGIELPSSVFSEICIGCGGCKNACPTNAIEMIPVEPVKITETYSKEAIPKI 89
           SK    E+   I+  +++  E+C+ CG C N CP +AIE        + + +  E I  I
Sbjct: 220 SKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIE--------VEKPFEGELI--I 269

Query: 90  DYDKCIYCLYCHDFCPVFAL 109
           D   C  C  C   CP  AL
Sbjct: 270 DEPACNACGACISVCPCNAL 289



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 50  EICIGCGGCKNACPTNAIEMI-----PVEPVKITETYSK-EAIPKIDYDKCIYCLYCHDF 103
           + C+ C  C+ ACP NAIE I         +K  E Y + +    ID + C+ C +C + 
Sbjct: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANI 251

Query: 104 CPVFAL 109
           CP  A+
Sbjct: 252 CPADAI 257



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 25  NDR-YTSKEMTAEILKGIELPSSVFSEICIGCGGCKNACPTNAIEMIPVEPVKITETYSK 83
           ND+  T      +I +GIEL  S     C+ C  C+  CP  AI++    P + +    +
Sbjct: 91  NDKPITEMPQYPKIKRGIELNQSK----CVLCEQCELVCPQCAIDVEREVPERKSLVLGE 146

Query: 84  EAIPKIDYDKCIYCLYCHDFCPVFAL 109
             I K   D C+ C  C ++CP  A+
Sbjct: 147 ITIKK---DDCVLCGICAEYCPADAI 169



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 22/30 (73%), Gaps = 1/30 (3%)

Query: 39  KGIELPSSVFSE-ICIGCGGCKNACPTNAI 67
           +G ++P+ V ++ +CI CG C ++CP +A+
Sbjct: 297 QGDKVPNVVVNQDVCILCGACTHSCPVDAL 326



 Score = 26.2 bits (56), Expect = 6e-04
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 75  VKITETYSKEAIPKIDYDKCIYCLYCHDFCPVFALFNEVSPIHPRHVGE-DIIQVDLSK 132
           ++I+ +  ++ + K D   C+ C  C + CP  A+  E+ P+     G+ D  ++D+S+
Sbjct: 13  IEISRSGVEKRVLKWDDCTCVGCGICSEICPTSAI--EMGPLGAIFKGDIDAPKLDISE 69